RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SFXN2Q96NB2 322 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 FRG2BQ96QU4 278 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR6C1Q96RD1 312 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 GAL3ST1Q99999 423 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 C16orf70Q9BSU1 422 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 FICDQ9BVA6 458 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SSBP3Q9BWW4 388 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 CRNKL1Q9BZJ0 848 aaKnown RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 EXO5Q9H790 373 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SYNDIG1Q9H7V2 258 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 MED20Q9H944 212 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 AGPAT3Q9NRZ7 376 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 DONSONQ9NYP3 566 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 RDH8Q9NYR8 311 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SEMA5BQ9P283 1151 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 PLEKHB1Q9UF11 243 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 NDRG3Q9UGV2 375 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 KCNJ14Q9UNX9 436 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ERVK-11Q9UQG0 969 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 CHMP2BQ9UQN3 213 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 B3GALT5Q9Y2C3 310 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SH3GLB1Q9Y371 365 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATP6V1DQ9Y5K8 247 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 COL1A1P02452 1464 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 FNDC1Q4ZHG4 1894 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 ILVBLA1L0T0 632 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM89A2RUT3 159 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 ACOD1A6NK06 481 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM200CA6NKL6 621 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 C4orf47A7E2U8 309 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 WRBO00258 174 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CLIC1O00299 241 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC28A1O00337 649 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 NDUFS4O43181 175 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 GRID2O43424 1007 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 SSX4O60224 188 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 ECE2O60344 883 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 LPXNO60711 386 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR6A2O95222 327 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 LUC7L3O95232 432 aaKnown RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 PEX11BO96011 259 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CSN3P07498 182 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CD63P08962 238 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 PABPC4LP0CB38 370 aaKnown RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CYP2D6P10635 497 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 NCF2P19878 526 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CHMLP26374 656 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 YWHAQP27348 245 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CDC25AP30304 524 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 FCGR2BP31994 310 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CA8P35219 290 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 NUP62P37198 522 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CAPGP40121 348 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 FOLR3P41439 243 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 LHX1P48742 406 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC11A1P49279 550 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 FMO5P49326 533 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 FKBP1AP62942 108 aaKnown RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 IRX4P78413 519 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 DLK1P80370 383 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 DNAJC3Q13217 504 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 MFSD13AQ14CX5 517 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 PTPRRQ15256 657 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 MEP1AQ16819 746 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CERKLQ49MI3 558 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 RABGAP1LQ5R372 815 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 PHYHD1Q5SRE7 291 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 VWA5B1Q5TIE3 1220 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 SIGIRRQ6IA17 410 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 LCNL1Q6ZST4 164 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CDR2LQ86X02 465 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 ARHGEF19Q8IW93 802 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 STHQ8IWL8 128 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 LINC00469Q8N7U9 141 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 RDM1Q8NG50 284 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 DQX1Q8TE96 717 aaKnown RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 DNAJA4Q8WW22 397 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 ASB10Q8WXI3 467 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 EXTL1Q92935 676 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 SNAPC3Q92966 411 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 EFHD2Q96C19 240 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 LRRC39Q96DD0 335 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC41A3Q96GZ6 507 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 DHTKD1Q96HY7 919 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 FCRL4Q96PJ5 515 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 GFI1Q99684 422 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 GPA33Q99795 319 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 FNDC11Q9BVV2 318 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 MRIQ9BWK5 157 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 RNF26Q9BY78 433 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 COA1Q9GZY4 146 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 FN3KRPQ9HA64 309 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CD209Q9NNX6 404 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 ADARB2Q9NS39 739 aaKnown RBP4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 DPP3Q9NY33 737 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 CHMP5Q9NZZ3 219 aa4.09□□□□□ -1.75
HMGB1P21-201ENST00000502313 COPS7AQ9UBW8 275 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms