RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 SYNPOQ8N3V7 929 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 TTC29Q8NA56 475 aaPredicted RBP11.97□□□□□ -0.49
AFF3-215ENST00000498090 OR7A2PQ8NGA2 310 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 FAM3CQ92520 227 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 ELMO1Q92556 727 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 FCGR1BQ92637 280 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 MSANTD3Q96H12 275 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 VPS35Q96QK1 796 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 FAM129BQ96TA1 746 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 PITX2Q99697 317 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 CHCHD3Q9NX63 227 aaKnown RBP11.97□□□□□ -0.49
AFF3-215ENST00000498090 SIRT5Q9NXA8 310 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 GIN1Q9NXP7 522 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 KIF17Q9P2E2 1029 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 CA14Q9ULX7 337 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 ERGIC3Q9Y282 383 aa11.97□□□□□ -0.49
AFF3-215ENST00000498090 TSPAN11A1L157 253 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 PTGES3LE9PB15 166 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 KPNA4O00629 521 aaPredicted RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 SCAMP2O15127 329 aaKnown RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 C9P02748 559 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 OCM2P0CE71 109 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 OCMP0CE72 109 aaPredicted RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 AGXTP21549 392 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 ACVR2AP27037 513 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 HTR1BP28222 390 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 ST13P50502 369 aaKnown RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 DAPP51397 102 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 WNT3P56703 355 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 TEKQ02763 1124 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 EMX1Q04741 257 aaPredicted RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 GTF2H3Q13889 308 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 CCINQ13939 588 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 E2F2Q14209 437 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 NR1D2Q14995 579 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 CTF1Q16619 201 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 DGUOKQ16854 277 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 ARSIQ5FYB1 569 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 XKR6Q5GH73 641 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 FAHD1Q6P587 224 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 GALNT18Q6P9A2 607 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 PRSS48Q7RTY5 328 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 CYP4Z1Q86W10 505 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 GJD3Q8N144 294 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 RNF217Q8TC41 542 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 FAR1Q8WVX9 515 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 C11orf24Q96F05 449 aaPredicted RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 LRIG1Q96JA1 1093 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 FOPNLQ96NB1 174 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 CSF3RQ99062 836 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 DUSP26Q9BV47 211 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 DGCR6LQ9BY27 220 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 CCDC90BQ9GZT6 254 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 RIBC2Q9H4K1 309 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 PRSS16Q9NQE7 514 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 KRT84Q9NSB2 600 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 PDP1Q9P0J1 537 aaPredicted RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 ZNF282Q9UDV7 671 aaPredicted RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 IL36AQ9UHA7 158 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 PADI2Q9Y2J8 665 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 SAMHD1Q9Y3Z3 626 aaKnown RBP11.96□□□□□ -0.5
AFF3-215ENST00000498090 PCDHGB3Q9Y5G1 929 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 U3KQV3 271 aa11.96□□□□□ -0.5
AFF3-215ENST00000498090 KRBA1A5PL33 1030 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 A8MVJ9 347 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 TMX2-CTNND1H3BSU7 103 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 DLL1O00548 723 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 RNASET2O00584 256 aaKnown RBP11.95□□□□□ -0.5
AFF3-215ENST00000498090 SUV39H1O43463 412 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 RGS10O43665 173 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 ADAM23O75077 832 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 ATG13O75143 517 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 SULT1C4O75897 302 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 LRATO95237 230 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 EPHX1P07099 455 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 COL9A1P20849 921 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 ITPKAP23677 461 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 PCGF2P35227 344 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 PXNP49023 591 aaPredicted RBP11.95□□□□□ -0.5
AFF3-215ENST00000498090 GP2P55259 537 aaKnown RBP11.95□□□□□ -0.5
AFF3-215ENST00000498090 ELAVL3Q14576 367 aaKnown RBP11.95□□□□□ -0.5
AFF3-215ENST00000498090 NPTX1Q15818 432 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 ZNF284Q2VY69 593 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 POM121L1PQ3SYA9 428 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 SYTL3Q4VX76 610 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 C2orf27AQ580R0 203 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 CPTPQ5TA50 214 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 NIPAL1Q6NVV3 410 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 B3GNT8Q7Z7M8 397 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 PTOV1Q86YD1 416 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 VRK3Q8IV63 474 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 C10orf111Q8N326 155 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 IL17RCQ8NAC3 791 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 FBXO15Q8NCQ5 510 aaPredicted RBP11.95□□□□□ -0.5
AFF3-215ENST00000498090 ABHD11Q8NFV4 315 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 TMEM159Q96B96 161 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 PYCR2Q96C36 320 aa11.95□□□□□ -0.5
AFF3-215ENST00000498090 COQ8BQ96D53 544 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms