RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SPAG4Q9NPE6 437 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 HPS4Q9NQG7 708 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 FAM53CQ9NYF3 392 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 THEGQ9P2T0 379 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 NARFQ9UHQ1 456 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 UTS2RQ9UKP6 389 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CNOT6Q9ULM6 557 aaKnown RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 WDR83OSQ9Y284 106 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CCDC144AA2RUR9 1427 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 METP08581 1390 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PLEKHG2Q9H7P9 1386 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 KIF1BO60333 1816 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 A0A1W2PN81 502 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 LRRC3CA6NJW4 275 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF208O43345 1280 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 SCO2O43819 266 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 ACSL4O60488 711 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CSF2P04141 144 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CA3P07451 260 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 SFTPBP07988 381 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CEACAM1P13688 526 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 GNSP15586 552 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 ACO1P21399 889 aaKnown RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PTBP1P26599 531 aaKnown RBP eCLIP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 DPP4P27487 766 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CHRNA7P36544 502 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 DLSTP36957 453 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 GRIA3P42263 894 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 MAGEA11P43364 429 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PEX5P50542 639 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 TNFSF10P50591 281 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 P2RX3P56373 397 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 RPL23AP62750 156 aaKnown RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 SIM1P81133 766 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 MBTD1Q05BQ5 628 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 SLC3A1Q07837 685 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 LAMB3Q13751 1172 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 STX1AQ16623 288 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CERKLQ49MI3 558 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 NKAIN2Q5VXU1 208 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 KCTD18Q6PI47 426 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PLXDC2Q6UX71 529 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 GPR141Q7Z602 305 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 BIVMQ86UB2 503 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 LONP2Q86WA8 852 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 FAM131BQ86XD5 332 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 THAP8Q8NA92 274 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PIGBQ92521 554 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 GPR137Q96N19 417 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 GUCD1Q96NT3 240 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 FCRL4Q96PJ5 515 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 RAB40CQ96S21 281 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PRMT1Q99873 361 aaKnown RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 TRMT61BQ9BVS5 477 aaKnown RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PRRG4Q9BZD6 226 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 SLC7A5P2Q9GIP4 190 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CNGB3Q9NQW8 809 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 ACOXLQ9NUZ1 547 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PSORS1C1Q9UIG5 152 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CRLS1Q9UJA2 301 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 FBXL2Q9UKC9 423 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PADI3Q9ULW8 664 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PCDHA7Q9UN72 937 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PLCL2Q9UPR0 1127 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 FOXJ3Q9UPW0 622 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 NOSIPQ9Y314 301 aaKnown RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 DIP2AQ14689 1571 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PHLPP2Q6ZVD8 1323 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 NKTRP30414 1462 aaKnown RBP5.7□□□□□ -1.5
BRCA1-224ENST00000497488 PPLO60437 1756 aa5.7□□□□□ -1.5
BRCA1-224ENST00000497488 CHD2O14647 1828 aaKnown RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 SETD1AO15047 1707 aaKnown RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 XRN1Q8IZH2 1706 aaKnown RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 HYKKA2RU49 373 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ASB14A6NK59 587 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 RFXAPO00287 272 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 WNT9BO14905 357 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF264O43296 627 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 LDB3O75112 727 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 FLOT1O75955 427 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 PIGNO95427 931 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 WDPCPO95876 746 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 NPPAP01160 153 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 MT-ND1P03886 318 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CAPN1P07384 714 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 B4GALT1P15291 398 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 BDKRB2P30411 391 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 SSTR1P30872 391 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 HNRNPH1P31943 449 aaKnown RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 ACADVLP49748 655 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CDH12P55289 794 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CLDN20P56880 219 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 HSPA14Q0VDF9 509 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 DMP1Q13316 513 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-224ENST00000497488 RBBP7Q16576 425 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 MLANAQ16655 118 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 POM121L1PQ3SYA9 428 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 RAB6CQ53S08 254 aa5.69□□□□□ -1.5
BRCA1-224ENST00000497488 CMPK2Q5EBM0 449 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms