RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 MSLNQ13421 630 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CUL3Q13618 768 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 HTR4Q13639 388 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 EFNB3Q15768 340 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MEP1AQ16819 746 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 KRTAP19-4Q3LI73 84 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 LBHQ53QV2 105 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 AGAP6Q5VW22 663 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRAMEF8Q5VWM4 474 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 C18orf63Q68DL7 685 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CASC4Q6P4E1 433 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 PODNL1Q6PEZ8 512 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF852Q6ZMS4 543 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZBTB49Q6ZSB9 765 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MEPCEQ7L2J0 689 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 NRARPQ7Z6K4 114 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHSY1Q86X52 802 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ADGRG3Q86Y34 549 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 BATF2Q8N1L9 274 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ARHGAP24Q8N264 748 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 FBXO39Q8N4B4 442 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SPEM1Q8N4L4 309 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 AADATQ8N5Z0 425 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 BMPERQ8N8U9 685 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM71CQ8NEG0 241 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 PROKR1Q8TCW9 393 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SSC4DQ8WTU2 575 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC20A1Q8WUM9 679 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RAB7BQ96AH8 199 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 OTUB1Q96FW1 271 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 GRAMD2BQ96HH9 432 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZFYVE19Q96K21 471 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CDK5RAP1Q96SZ6 601 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MTG1Q9BT17 334 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 LMF2Q9BU23 707 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MMTAG2Q9BU76 263 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RPP25Q9BUL9 199 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MLST8Q9BVC4 326 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 TEX13BQ9BXU2 312 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 POLR1EQ9GZS1 481 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CARD9Q9H257 536 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 UBQLN3Q9H347 655 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 DPAGT1Q9H3H5 408 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 TOR3AQ9H497 397 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RAD21L1Q9H4I0 556 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MAP6D1Q9H9H5 199 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SEBOXQ9HB31 216 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CPNE5Q9HCH3 593 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM212BQ9NTI7 297 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM184CQ9NVA4 438 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMEM161AQ9NX61 479 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 HOXC10Q9NYD6 342 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 DONSONQ9NYP3 566 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 KLHL13Q9P2N7 655 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC17A6Q9P2U8 582 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 LRWD1Q9UFC0 647 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 UBQLN2Q9UHD9 624 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 LAMP5Q9UJQ1 280 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 TTC7AQ9ULT0 858 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC8A2Q9UPR5 921 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 Q9Y3F1 56 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 DDX49Q9Y6V7 483 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ATP8B3O60423 1300 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RYR2Q92736 4967 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ABCA7Q8IZY2 2146 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 A0A087X0K7 114 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CFAP73A6NFT4 308 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CASTOR2A6NHX0 329 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 C1QTNF3-AMACRE9PGA6 284 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 MCF2LO15068 1137 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 ANKRD28O15084 1053 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 ATP2C2O75185 946 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 GAGE7O76087 117 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 RGS11O94810 467 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SNX4O95219 450 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 NADKO95544 446 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CLDN1O95832 211 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC25A27O95847 323 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PLGP00747 810 aaPredicted RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 TGFAP01135 160 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 GAGE12FP0CL80 117 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 GAGE12GP0CL81 117 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 GAGE12IP0CL82 117 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CTSAP10619 480 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 HSPA5P11021 654 aaKnown RBP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 HLA-EP13747 358 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CD59P13987 128 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 FERP16591 822 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHRNB2P17787 502 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 DNASE1P24855 282 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PSMB4P28070 264 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 AVPR1AP37288 418 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 PI4KAP42356 2102 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 MATR3P43243 847 aaKnown RBP eCLIP2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 GYG1P46976 350 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR3A1P47881 315 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 IFNAR2P48551 515 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 UCNP55089 124 aa2.31□□□□□ -2.04
CKS1BP2-201ENST00000497342 SELENOVP59797 346 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms