RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-215	ENST00000494058	ZNF473	Q8WTR7	871 aa	Known RBP	12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	GATA6	Q92908	595 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MR1	Q95460	341 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	RGMA	Q96B86	450 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	QRFPR	Q96P65	431 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	TBCD	Q9BTW9	1192 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	GPR87	Q9BY21	358 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SPRY4	Q9C004	299 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SLC6A16	Q9GZN6	736 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SPNS1	Q9H2V7	528 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MANSC1	Q9H8J5	431 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ZNF304	Q9HCX3	659 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	STARD5	Q9NSY2	213 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	THAP1	Q9NVV9	213 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	FOXJ2	Q9P0K8	574 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	IFT80	Q9P2H3	777 aa	Predicted RBP	12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	NXT1	Q9UKK6	140 aa	Known RBP	12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SPACA6	W5XKT8	324 aa		12.51	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SERTM1	A2A2V5	107 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	KLF11	O14901	512 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	AZIN1	O14977	448 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	PRAMEF4	O60810	478 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SEMA3D	O95025	777 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ALB	P02768	609 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	RAB40AL	P0C0E4	278 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	CHN1	P15882	459 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	RORA	P35398	523 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SLC1A6	P48664	564 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	OCA2	Q04671	838 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	IMPG1	Q17R60	797 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	AP5B1	Q2VPB7	878 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ADPRM	Q3LIE5	342 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	NKAIN1	Q4KMZ8	207 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	TOR1AIP1	Q5JTV8	583 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	DEPDC1	Q5TB30	811 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	BROX	Q5VW32	411 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	PRAMEF9	Q5VWM5	478 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	UNQ6494/PRO21346	Q6UXR6	183 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	RPS27L	Q71UM5	84 aa	Known RBP	12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	KCT2	Q8NC54	265 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	OR6Y1	Q8NGX8	325 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	LRRC8C	Q8TDW0	803 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ADAMTS18	Q8TE60	1221 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	KCNE4	Q8WWG9	221 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	COL26A1	Q96A83	441 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	FKBP10	Q96AY3	582 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MMAB	Q96EY8	250 aa	Predicted RBP	12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	VPS50	Q96JG6	964 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MTERF1	Q99551	399 aa	Known RBP	12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	NPL	Q9BXD5	320 aa	Predicted RBP	12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MS4A8	Q9BY19	250 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MLXIPL	Q9NP71	852 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	LHX9	Q9NQ69	397 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	DMRT3	Q9NQL9	472 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	RAP2C	Q9Y3L5	183 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	TRAF6	Q9Y4K3	522 aa		12.5	□□□□□ -0.41
SKIV2L-215	ENST00000494058	CACNA1A	O00555	2505 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ARHGAP10	A1A4S6	786 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	PMS2P1	A4D2B8	440 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MAGEB17	A8MXT2	336 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SLCO1B7	G3V0H7	640 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SLC28A1	O00337	649 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MANBA	O00462	879 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	FFAR3	O14843	346 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	GPR42	O15529	346 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ERI3	O43414	337 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	B3GALT2	O43825	422 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	TIAF1	O95411	115 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ONECUT2	O95948	504 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	TGFB1	P01137	390 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	BGN	P21810	368 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	FBL	P22087	321 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	GCGR	P47871	477 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	HK2	P52789	917 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MTTP	P55157	894 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	WDR4	P57081	412 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	DSG2	Q14126	1118 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SGO1	Q5FBB7	561 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SH2D4B	Q5SQS7	431 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ARHGAP40	Q5TG30	622 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	RNF165	Q6ZSG1	346 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ZCCHC23	Q6ZST2	131 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ZFAND4	Q86XD8	727 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	DTX1	Q86Y01	620 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ZSCAN1	Q8NBB4	408 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	UTP15	Q8TED0	518 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MTFMT	Q96DP5	389 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MS4A6E	Q96DS6	147 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	METTL2A	Q96IZ6	378 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	GBP5	Q96PP8	586 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MKKS	Q9NPJ1	570 aa	Predicted RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	DHCR7	Q9UBM7	475 aa	Known RBP	12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	VPS29	Q9UBQ0	182 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	MAP4K5	Q9Y4K4	846 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	ADAMTS20	P59510	1910 aa		12.49	□□□□□ -0.41
SKIV2L-215	ENST00000494058	SYNDIG1L	A6NDD5	238 aa		12.48	□□□□□ -0.41
SKIV2L-215	ENST00000494058	PSMD12	O00232	456 aa	Predicted RBP	12.48	□□□□□ -0.41
SKIV2L-215	ENST00000494058	PPP6C	O00743	305 aa		12.48	□□□□□ -0.41
SKIV2L-215	ENST00000494058	UBFD1	O14562	309 aa	Known RBP	12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms