RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 THUMPD1Q9NXG2 353 aaKnown RBP9.36□□□□□ -0.91
VPS8-225ENST00000492449 PFDN2Q9UHV9 154 aa9.36□□□□□ -0.91
VPS8-225ENST00000492449 GPN3Q9UHW5 284 aaPredicted RBP9.36□□□□□ -0.91
VPS8-225ENST00000492449 SCP2D1Q9UJQ7 156 aa9.36□□□□□ -0.91
VPS8-225ENST00000492449 MKL2Q9ULH7 1088 aa9.36□□□□□ -0.91
VPS8-225ENST00000492449 SAMHD1Q9Y3Z3 626 aaKnown RBP9.36□□□□□ -0.91
VPS8-225ENST00000492449 MYO1GB0I1T2 1018 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 H7C2Y5 167 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 MLYCDO95822 493 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ICAM1P05362 532 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 FCER2P06734 321 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ADRB1P08588 477 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ADRA2AP08913 450 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 SMIM6P0DI80 62 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 FDXRP22570 491 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ITPKAP23677 461 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 APEX1P27695 318 aaKnown RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 ZNF33AQ06730 810 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 OR4D1Q15615 310 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 SOWAHAQ2M3V2 549 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ERICH5Q6P6B1 374 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 BHLHB9Q6PI77 547 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 TMEM163Q8TC26 289 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ERMAPQ96PL5 475 aaPredicted RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 CPPED1Q9BRF8 314 aaPredicted RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 H2AFJQ9BTM1 129 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 RBCK1Q9BYM8 510 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 GSN-AS1Q9NRJ2 163 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ZNF225Q9UK10 706 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 SSR3Q9UNL2 185 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 PCDHGA2Q9Y5H1 932 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 PRAMEF33A0A0G2JMD5 474 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 PMS2P1A4D2B8 440 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 WWP2O00308 870 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 WNT9AO14904 365 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 TPST2O60704 377 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 EIF1BO60739 113 aaKnown RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 PRAMEF10O60809 474 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 GLUD1P00367 558 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 DHFRP00374 187 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 NMBP08949 121 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 SLC10A3P09131 477 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 HOXB8P17481 243 aaPredicted RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 AKT1P31749 480 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ADRA1AP35348 466 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 EIF1P41567 113 aaKnown RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 HSPA7P48741 367 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 HNRNPA0Q13151 305 aaKnown RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 MPEG1Q2M385 716 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 HFEQ30201 348 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 SLC25A52Q3SY17 297 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 MANEALQ5VSG8 457 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 ANKS6Q68DC2 871 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 Q6ZSR9 355 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 C1QTNF6Q9BXI9 259 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 REEP1Q9H902 201 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 AMBNQ9NP70 447 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 EXOSC4Q9NPD3 245 aaKnown RBP9.35□□□□□ -0.91
VPS8-225ENST00000492449 POMT2Q9UKY4 750 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 PLCL2Q9UPR0 1127 aa9.35□□□□□ -0.91
VPS8-225ENST00000492449 SBF1O95248 1867 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 A8MVJ9 347 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 PER2O15055 1255 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 KERAO60938 352 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CDRT1O95170 752 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ESR1P03372 595 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 G6PDP11413 515 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SELLP14151 372 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 HOXB9P17482 250 aaPredicted RBP9.34□□□□□ -0.91
VPS8-225ENST00000492449 SSTR4P31391 388 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CD96P40200 585 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 EFNA5P52803 228 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 NUDT6P53370 316 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 MAP4K2Q12851 820 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CDH18Q13634 790 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CAPSQ13938 189 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SMAD2Q15796 467 aaKnown RBP9.34□□□□□ -0.91
VPS8-225ENST00000492449 MICBQ29980 383 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 TTLL9Q3SXZ7 439 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 C3orf38Q5JPI3 329 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 CDKL4Q5MAI5 379 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 LRIF1Q5T3J3 769 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 DCAF15Q66K64 600 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 ATRAIDQ6UW56 229 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 C17orf107Q6ZR85 190 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 OR6C4Q8NGE1 309 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 LPPQ93052 612 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 MTERF3Q96E29 417 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 MND1Q9BWT6 205 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 NT5C1AQ9BXI3 368 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 NXF3Q9H4D5 531 aaKnown RBP9.34□□□□□ -0.91
VPS8-225ENST00000492449 DLL4Q9NR61 685 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 MS4A12Q9NXJ0 267 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 KCTD5Q9NXV2 234 aa9.34□□□□□ -0.91
VPS8-225ENST00000492449 TAS2R16Q9NYV7 291 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms