RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 OR2A1Q8NGT9 310 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 OR56A3Q8NH54 315 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 PRR7Q8TB68 274 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 SREK1Q8WXA9 508 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 C10orf90Q96M02 699 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 ZIM3Q96PE6 472 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 ILKAPQ9H0C8 392 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 SLC26A1Q9H2B4 701 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 MRPL46Q9H2W6 279 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 ENAMQ9NRM1 1142 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 TMEM184CQ9NVA4 438 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 CUEDC1Q9NWM3 386 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 PCDHGA10Q9Y5H3 936 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 ACTL7BQ9Y614 415 aa10.48□□□□□ -0.73
TMEM39A-211ENST00000491685 FITM1A5D6W6 292 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 NCF1BA6NI72 391 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 VSTM2BA6NLU5 285 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 NCF1CA8MVU1 366 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 TXNDC9O14530 226 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 SRPX2O60687 465 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 CBX6O95503 412 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 CLDN1O95832 211 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 ALBP02768 609 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 NCF1P14598 390 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 NPPBP16860 134 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 GNAZP19086 355 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 COL8A1P27658 744 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 IMPA1P29218 277 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 GGT5P36269 586 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PIK3CGP48736 1102 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 ALDH18A1P54886 795 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 NAA20P61599 178 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 SNRPNP63162 240 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 IRF9Q00978 393 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 RELAQ04206 551 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 ASPHQ12797 758 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 AIMP2Q13155 320 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 GRM7Q14831 915 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 HIST2H2ACQ16777 129 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PFKFB4Q16877 469 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 FAM214AQ32MH5 1076 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 HSP90B2PQ58FF3 399 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 WASHC2DQ5SRD0 308 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PRAMEF13Q5VWM6 474 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 ICE2Q659A1 982 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 HIST2H2AA3Q6FI13 130 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 RNF44Q7L0R7 432 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 THOC6Q86W42 341 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 TICAM1Q8IUC6 712 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 SLC22A9Q8IVM8 553 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PRSS58Q8IYP2 241 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 CYP4X1Q8N118 509 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PPFIBP2Q8ND30 876 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PPP4R1Q8TF05 950 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 EXT2Q93063 718 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 RHBDF1Q96CC6 855 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 SH3GL2Q99962 352 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 ACAT2Q9BWD1 397 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 CD244Q9BZW8 370 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 UNKQ9C0B0 810 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 WDR54Q9H977 334 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PRM3Q9NNZ6 103 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 ATP13A2Q9NQ11 1180 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 GPRC5BQ9NZH0 403 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 CPSF2Q9P2I0 782 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 TAC3Q9UHF0 121 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 LGALS13Q9UHV8 139 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 PTBP2Q9UKA9 531 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 SLC22A14Q9Y267 594 aa10.47□□□□□ -0.73
TMEM39A-211ENST00000491685 IGKV1-8A0A0C4DH67 115 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 HYKKA2RU49 373 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 OR2A25A4D2G3 310 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 E2F3O00716 465 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 PRPF4O43172 522 aaKnown RBP eCLIP10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 CCNT2O60583 730 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 WDR47O94967 919 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 LDLRP01130 860 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 EFNA3P52797 238 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 RIPPLY3P57055 190 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 SLC18A2Q05940 514 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 KLC1Q07866 573 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 ZNF844Q08AG5 666 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 DLG1Q12959 904 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 LAPTM5Q13571 262 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 OR4D1Q15615 310 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 RBBP7Q16576 425 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 PPP1R3AQ16821 1122 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 TUBB8Q3ZCM7 444 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 ADCK2Q7Z695 626 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 TRABD2AQ86V40 505 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 SRRM1Q8IYB3 904 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 CENPLQ8N0S6 344 aaPredicted RBP10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 SHISA5Q8N114 240 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 PLD6Q8N2A8 252 aaKnown RBP10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 SNX31Q8N9S9 440 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 PDPRQ8NCN5 879 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 OR11G2Q8NGC1 345 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 RDH11Q8TC12 318 aa10.46□□□□□ -0.73
TMEM39A-211ENST00000491685 ATP6V1E2Q96A05 226 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms