RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 EID3Q8N140 333 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 ZFP62Q8NB50 900 aaPredicted RBP12.36□□□□□ -0.43
USF1-206ENST00000491629 POGLUT1Q8NBL1 392 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 ZNF740Q8NDX6 193 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 SLC13A3Q8WWT9 602 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 RND1Q92730 232 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 THAP11Q96EK4 314 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 TCF12Q99081 682 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 KCNJ16Q9NPI9 418 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
USF1-206ENST00000491629 DEPPQ9NTK1 212 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 PAK5Q9P286 719 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 ZNF223Q9UK11 482 aaPredicted RBP12.36□□□□□ -0.43
USF1-206ENST00000491629 ADAMTS6Q9UKP5 1117 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 SOX13Q9UN79 622 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 RPH3AQ9Y2J0 694 aaPredicted RBP12.36□□□□□ -0.43
USF1-206ENST00000491629 SLC22A7Q9Y694 548 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 ZANQ9Y493 2812 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 TLN2Q9Y4G6 2542 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 A0A1B0GTL3 188 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 SAGE2PA6NJ88 616 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 CHST10O43529 356 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 KLK8O60259 260 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 GALR3O60755 368 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 B4GALT2O60909 372 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 MPC1LP0DKB6 136 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 OGNP20774 298 aaKnown RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 GPR85P60893 370 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 TIAL1Q01085 375 aaKnown RBP eCLIP12.35□□□□□ -0.43
USF1-206ENST00000491629 FOXD4Q12950 439 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 SKOR2Q2VWA4 1001 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 KIAA0930Q6ICG6 404 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 TMEM211Q6ICI0 200 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 CAPN13Q6MZZ7 669 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 PIWIL4Q7Z3Z4 852 aaKnown RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 SDCCAG8Q86SQ7 713 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 ASPGQ86U10 573 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 CAMKVQ8NCB2 501 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 APCDD1LQ8NCL9 501 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 TBC1D20Q96BZ9 403 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 TP63Q9H3D4 680 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 CCDC177Q9NQR7 707 aaPredicted RBP12.35□□□□□ -0.43
USF1-206ENST00000491629 BFARQ9NZS9 450 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 L3MBTL1Q9Y468 752 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 CAPN6Q9Y6Q1 641 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 KIAA1549Q9HCM3 1950 aa12.35□□□□□ -0.43
USF1-206ENST00000491629 RTTNQ86VV8 2226 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 C4orf51C9J302 202 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 E5RI56 91 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 AVILO75366 819 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 CTAG2O75638 210 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 CDH1P12830 882 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 MAOAP21397 527 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 IL10P22301 178 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 HRH2P25021 359 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 MEF2AQ02078 507 aaPredicted RBP12.34□□□□□ -0.43
USF1-206ENST00000491629 SNTB1Q13884 538 aaKnown RBP12.34□□□□□ -0.43
USF1-206ENST00000491629 CEBPEQ15744 281 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 CES4AQ5XG92 561 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 RTL6Q6ICC9 239 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 UBE2R2Q712K3 238 aaPredicted RBP12.34□□□□□ -0.43
USF1-206ENST00000491629 SLC13A5Q86YT5 568 aaPredicted RBP12.34□□□□□ -0.43
USF1-206ENST00000491629 LIX1LQ8IVB5 337 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 DENND6AQ8IWF6 608 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 MFSD9Q8NBP5 474 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 CD200R1Q8TD46 325 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 PTCHD1Q96NR3 888 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 PANX2Q96RD6 677 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 GPR21Q99679 349 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 ATG10Q9H0Y0 220 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 DEFB127Q9H1M4 99 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 SPNS1Q9H2V7 528 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 NECTIN3Q9NQS3 549 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 KLF13Q9Y2Y9 288 aaPredicted RBP12.34□□□□□ -0.43
USF1-206ENST00000491629 DHRS7Q9Y394 339 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 FAM215AQ9Y5M1 114 aa12.34□□□□□ -0.43
USF1-206ENST00000491629 A0A0G2JMM0 328 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 A0A1W2PPB8 328 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 A0A1W2PRS3 328 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 TCRBV16S1A1N1A0A5B0 115 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 TMEM200CA6NKL6 621 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 A8MUA0 341 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 KIR3DP1A8MWS1 328 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 KLRC4-KLRK1H3BQV0 150 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 ZBTB14O43829 449 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 PRKNO60260 465 aaPredicted RBP12.33□□□□□ -0.44
USF1-206ENST00000491629 PRMT3O60678 531 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 NPPBP16860 134 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 GPR143P51810 404 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 MYBPHQ13203 477 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 CTBP1Q13363 440 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 DEFB134Q4QY38 66 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 NEPROQ6NW34 567 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 C16orf47Q6ZP98 133 aaPredicted RBP12.33□□□□□ -0.44
USF1-206ENST00000491629 QSOX2Q6ZRP7 698 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 CPNE9Q8IYJ1 553 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms