RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ATP5F1P24539 256 aaPredicted RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HPDP32754 393 aaPredicted RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HNF4AP41235 474 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 POLE2P56282 527 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 KLC1Q07866 573 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ATP1A4Q13733 1029 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 DEFB134Q4QY38 66 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 VWA2Q5GFL6 755 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ADNP2Q6IQ32 1131 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MRGPREQ86SM8 312 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MYLK4Q86YV6 388 aaPredicted RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZC3H7AQ8IWR0 971 aaKnown RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LAS2Q8IYD9 372 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LSM14AQ8ND56 463 aaKnown RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GAL3ST3Q96A11 431 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 NSUN5Q96P11 429 aaKnown RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 AICDAQ9GZX7 198 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 KLHL31Q9H511 634 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 NOL11Q9H8H0 719 aaKnown RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SEMA3GQ9NS98 782 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HCN3Q9P1Z3 774 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LRIT2A6NDA9 550 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZNF860A6NHJ4 632 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ARGFXA6NJG6 315 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 C4orf51C9J302 202 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PEX12O00623 359 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 COPEO14579 308 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 OR7A17O14581 309 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 DLX3O60479 287 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 B3GALT4O96024 378 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 FAM87AP0C7U9 286 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SMIM10L1P0DMW3 83 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 KRT4P19013 534 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MMP11P24347 488 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SERPINB1P30740 379 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HNRNPH1P31943 449 aaKnown RBP15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CRHR1P34998 444 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ARL1P40616 181 aaPredicted RBP15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CCT5P48643 541 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CCNG1P51959 295 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RAB8AP61006 207 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RBBP7Q16576 425 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CPZQ66K79 652 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PPP1R32Q7Z5V6 425 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SLC22A9Q8IVM8 553 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 APLFQ8IW19 511 aaPredicted RBP15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 C4orf33Q8N1A6 199 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 L3MBTL4Q8NA19 623 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 OR51Q1Q8NH59 317 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZNF483Q8TF39 744 aaPredicted RBP15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ATP6V1E2Q96A05 226 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 NACC2Q96BF6 587 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MS4A6EQ96DS6 147 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SMIM10Q96HG1 83 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 BBC3Q96PG8 261 aaPredicted RBP15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TMEM109Q9BVC6 243 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 C1QTNF3Q9BXJ4 246 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PRM3Q9NNZ6 103 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 C3orf18Q9UK00 162 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 EMCNQ9ULC0 261 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GRID1Q9ULK0 1009 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SEC16AO15027 2179 aa15.41■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ERI3O43414 337 aaKnown RBP15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 BMP10O95393 424 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TBX6O95947 436 aaPredicted RBP15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PROCP04070 461 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 XCR1P46094 333 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RRADP55042 308 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HERVK_113P63132 956 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SLC18A2Q05940 514 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LY6DQ14210 128 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ADPRMQ3LIE5 342 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CCDC153Q494R4 210 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZNF678Q5SXM1 525 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MED25Q71SY5 747 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RPS27LQ71UM5 84 aaKnown RBP15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TRABD2AQ86V40 505 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LAPTM4BQ86VI4 370 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 EXD3Q8N9H8 876 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 OR7G3Q8NG95 312 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 OR52B6Q8NGF0 335 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 OR5T3Q8NGG3 340 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZNF473Q8WTR7 871 aaKnown RBP15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 REPS1Q96D71 796 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TMEM237Q96Q45 408 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 NTMT1Q9BV86 223 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ERVK-6Q9BXR3 956 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 REXO4Q9GZR2 422 aaKnown RBP15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ING2Q9H160 280 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ADNPQ9H2P0 1102 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZBTB26Q9HCK0 441 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SEMA4BQ9NPR2 832 aaPredicted RBP15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ACSS2Q9NR19 701 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MKS1Q9NXB0 559 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 P4HTMQ9NXG6 502 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ADGRE2Q9UHX3 823 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PCDHGA11Q9Y5H2 935 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PCSK5Q92824 1860 aa15.4■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 A0A088AWK7 358 aa15.39■□□□□ 0.05
MSH5-SAPCD1-206ENST00000491552 IDSB3KWA1 339 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms