RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 MILR1Q7Z6M3 343 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 STK32CQ86UX6 486 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 ZNF583Q96ND8 569 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 ZBTB18Q99592 522 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 UGT2B28Q9BY64 529 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 SCHIP1Q9P0W5 487 aaPredicted RBP21.86■■□□□ 1.09
USF3-203ENST00000491165 A0A1W2PPW3 197 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 TRIM64BA6NI03 449 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 CBSLP0DN79 551 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 PCNAP12004 261 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 CBSP35520 551 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 ACTR1BP42025 376 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 CTSKP43235 329 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 RGS4P49798 205 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 ACTR1AP61163 376 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 PHKG1Q16816 387 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 OR2T12Q8NG77 320 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 NUDT8Q8WV74 236 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 SLC13A3Q8WWT9 602 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 SDCCAG3Q96C92 435 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 GORASP2Q9H8Y8 452 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 IRAK4Q9NWZ3 460 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 MUC6Q6W4X9 2439 aa21.86■■□□□ 1.09
USF3-203ENST00000491165 GSTA4O15217 222 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 SDC3O75056 442 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 GSTM1P09488 218 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 ACADLP28330 430 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 CLCNKAP51800 687 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 RPL38P63173 70 aaKnown RBP21.85■■□□□ 1.09
USF3-203ENST00000491165 PLIN5Q00G26 463 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 GSTM4Q03013 218 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 CLCA4Q14CN2 919 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 KIAA0040Q15053 153 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 ZDHHC13Q8IUH4 622 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 OR13F1Q8NGS4 319 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 GPBAR1Q8TDU6 330 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 FIG4Q92562 907 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 PPP1R14BQ96C90 147 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 NAA50Q9GZZ1 169 aaKnown RBP21.85■■□□□ 1.09
USF3-203ENST00000491165 DPEP2Q9H4A9 486 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 VAPAQ9P0L0 249 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 EIF3LQ9Y262 564 aaKnown RBP21.85■■□□□ 1.09
USF3-203ENST00000491165 DFNA5O60443 496 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 SLC2A4P14672 509 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 SHMT2P34897 504 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 FGD3Q5JSP0 725 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 BROXQ5VW32 411 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 RDH12Q96NR8 316 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 ZDHHC5Q9C0B5 715 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 CCL27Q9Y4X3 112 aa21.85■■□□□ 1.09
USF3-203ENST00000491165 OR52A4PA6NMU1 304 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 RGS14O43566 566 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 JUNBP17275 347 aaPredicted RBP21.84■■□□□ 1.09
USF3-203ENST00000491165 POLR2IP36954 125 aaKnown RBP21.84■■□□□ 1.09
USF3-203ENST00000491165 HSPA7P48741 367 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 CCSMST1Q4G0I0 132 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 DUS1LQ6P1R4 473 aaKnown RBP21.84■■□□□ 1.09
USF3-203ENST00000491165 THAP5Q7Z6K1 395 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 ASB11Q8WXH4 323 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 AURKBQ96GD4 344 aaPredicted RBP21.84■■□□□ 1.09
USF3-203ENST00000491165 NRTNQ99748 197 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 UCKL1Q9NWZ5 548 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 SUSD2Q9UGT4 822 aa21.84■■□□□ 1.09
USF3-203ENST00000491165 PRAMEF33A0A0G2JMD5 474 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 G3V2T6 193 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 EIF3FO00303 357 aaPredicted RBP21.83■■□□□ 1.09
USF3-203ENST00000491165 MAGEB3O15480 346 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 GUCA1CO95843 209 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 CFIP05156 583 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 MAD2L1Q13257 205 aaPredicted RBP21.83■■□□□ 1.09
USF3-203ENST00000491165 SHBQ15464 509 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 TEAD4Q15561 434 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.83■■□□□ 1.09
USF3-203ENST00000491165 MBOAT1Q6ZNC8 495 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 RASGRP3Q8IV61 690 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 TBC1D15Q8TC07 691 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 PATE1Q8WXA2 126 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 ARRDC1-AS1Q9H2J1 176 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 FANCEQ9HB96 536 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 CAPN10Q9HC96 672 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.83■■□□□ 1.09
USF3-203ENST00000491165 MAGED1Q9Y5V3 778 aaPredicted RBP21.83■■□□□ 1.09
USF3-203ENST00000491165 RALGAPA1Q6GYQ0 2036 aa21.83■■□□□ 1.09
USF3-203ENST00000491165 A6NCN8 305 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 GFYI3L273 518 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 B4GAT1O43505 415 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 BLKP51451 505 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 TMBIM6P55061 237 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 CYP4F3Q08477 520 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 RPA4Q13156 261 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 PTGR1Q14914 329 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 RBM48Q5RL73 367 aaKnown RBP21.83■■□□□ 1.08
USF3-203ENST00000491165 TTC23Q5W5X9 447 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 FKBP9P1Q75LS8 142 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 PDZD3Q86UT5 571 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 C8orf59Q8N0T1 100 aaPredicted RBP21.83■■□□□ 1.08
USF3-203ENST00000491165 ZNF548Q8NEK5 533 aaPredicted RBP21.83■■□□□ 1.08
USF3-203ENST00000491165 FBXO30Q8TB52 745 aa21.83■■□□□ 1.08
USF3-203ENST00000491165 INSM2Q96T92 566 aaPredicted RBP21.83■■□□□ 1.08
USF3-203ENST00000491165 THUMPD3Q9BV44 507 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms