RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 F8W8V4 182 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 CCNFP41002 786 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 SSR4P51571 173 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 ZNF136P52737 540 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 NR1H2P55055 460 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 RELAQ04206 551 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 SEMA3AQ14563 771 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 ANKRD20A2Q5SQ80 823 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 ANKRD20A1Q5TYW2 823 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 ANKRD20A3Q5VUR7 823 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 IL20RBQ6UXL0 311 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 MAATS1Q7Z4T9 603 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 KCT2Q8NC54 265 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 PPFIBP2Q8ND30 876 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 GSDMBQ8TAX9 411 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 PTCHD1Q96NR3 888 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 DACH2Q96NX9 599 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 OR1F2PQ96R84 312 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 LIN28AQ9H9Z2 209 aaKnown RBP12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 UBTD1Q9HAC8 227 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 HPF1Q9NWY4 346 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 LCMT1Q9UIC8 334 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 NAALAD2Q9Y3Q0 740 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 HYOU1Q9Y4L1 999 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
EXOSC3-207ENST00000490516 A0A087X1B8 175 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 TRGV5A0A0B4J1U4 118 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 SH3D21A4FU49 640 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 MROH6A6NGR9 719 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 EEF1E1-BLOC1S5C9J1V9 151 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 H7C0C1 242 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 EEF1E1O43324 174 aaKnown RBP12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 B4GALT2O60909 372 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 FHP07954 510 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 ERGP11308 486 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 ATP5OP48047 213 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 PTH2RP49190 550 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 BTG2P78543 158 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 TRIM14Q14142 442 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 CAPRIN1Q14444 709 aaKnown RBP12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 ZNF750Q32MQ0 723 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 GK5Q6ZS86 529 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 OR9A1PQ8NGU1 263 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 ALS2CR12Q96Q35 445 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 FAM173AQ9BQD7 235 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 IL1RL2Q9HB29 575 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 ZNF223Q9UK11 482 aaPredicted RBP12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 NENFQ9UMX5 172 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 EIF3LQ9Y262 564 aaKnown RBP12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 MRFAP1Q9Y605 127 aa12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
EXOSC3-207ENST00000490516 H7BY64 318 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 KCNAB3O43448 404 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 OR2J2O76002 312 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 OR6B1O95007 311 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 CCNDBP1O95273 360 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 GOT2P00505 430 aaKnown RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 SERPING1P05155 500 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 H2AFZP0C0S5 128 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 MAOAP21397 527 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 CNR1P21554 472 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 IL10P22301 178 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 PSMA3P25788 255 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 DNASE1L1P49184 302 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 CLCN2P51788 898 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 OLR1P78380 273 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 FOXO1Q12778 655 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 TNK1Q13470 666 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 ACKR1Q16570 336 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 XKR6Q5GH73 641 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 LRRC38Q5VT99 294 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 LDB1Q86U70 411 aaPredicted RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 FBXW8Q8N3Y1 598 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 MAGEC3Q8TD91 643 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 SREK1Q8WXA9 508 aaKnown RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 CTNNBL1Q8WYA6 563 aaPredicted RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 TBC1D20Q96BZ9 403 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 FOPNLQ96NB1 174 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 PRAP1Q96NZ9 151 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 GSX2Q9BZM3 304 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 SEMA4BQ9NPR2 832 aaPredicted RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 YAE1D1Q9NRH1 226 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 CHMP5Q9NZZ3 219 aa12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 C6orf203Q9P0P8 240 aaPredicted RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 YARS2Q9Y2Z4 477 aaKnown RBP12.66□□□□□ -0.38
EXOSC3-207ENST00000490516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.384e-6■■■■□ 23.7
EXOSC3-207ENST00000490516 SIAH2O43255 324 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 KIF5CO60282 957 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 HCN1O60741 890 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 EPPINO95925 133 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 FPR1P21462 350 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 SOX3P41225 446 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms