RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 MS4A6EQ96DS6 147 aa16.57■□□□□ 0.24
ERCC3-207ENST00000490062 CNDP1Q96KN2 507 aa16.57■□□□□ 0.24
ERCC3-207ENST00000490062 CCNL2Q96S94 520 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-207ENST00000490062 GATA5Q9BWX5 397 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-207ENST00000490062 SLC29A3Q9BZD2 475 aa16.57■□□□□ 0.24
ERCC3-207ENST00000490062 WDR54Q9H977 334 aa16.57■□□□□ 0.24
ERCC3-207ENST00000490062 CROTQ9UKG9 612 aa16.57■□□□□ 0.24
ERCC3-207ENST00000490062 ZMIZ1Q9ULJ6 1067 aa16.57■□□□□ 0.24
ERCC3-207ENST00000490062 MRPS2Q9Y399 296 aaKnown RBP16.57■□□□□ 0.24
ERCC3-207ENST00000490062 SERTM1A2A2V5 107 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 VSTM2BA6NLU5 285 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 GALR3O60755 368 aaPredicted RBP16.56■□□□□ 0.24
ERCC3-207ENST00000490062 ALOX12P18054 663 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 TCN2P20062 427 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 ALAS2P22557 587 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 SERPINB4P48594 390 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 SNRPNP63162 240 aaKnown RBP16.56■□□□□ 0.24
ERCC3-207ENST00000490062 SKP1P63208 163 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 ZRSR2Q15696 482 aaKnown RBP16.56■□□□□ 0.24
ERCC3-207ENST00000490062 CPSF6Q16630 551 aaKnown RBP eCLIP16.56■□□□□ 0.24
ERCC3-207ENST00000490062 TMEM35AQ53FP2 167 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 FRG2Q64ET8 278 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 GPRIN3Q6ZVF9 776 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 RPS27LQ71UM5 84 aaKnown RBP16.56■□□□□ 0.24
ERCC3-207ENST00000490062 AMER3Q8N944 861 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 SRFBP1Q8NEF9 429 aaKnown RBP16.56■□□□□ 0.24
ERCC3-207ENST00000490062 HUS1BQ8NHY5 278 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 ARL8AQ96BM9 186 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 ATP6V1G3Q96LB4 118 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 CDK15Q96Q40 435 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 FRG2BQ96QU4 278 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 TGIF2Q9GZN2 237 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 ANKHQ9HCJ1 492 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 ZNF304Q9HCX3 659 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 DMRT3Q9NQL9 472 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 MAP4K5Q9Y4K4 846 aa16.56■□□□□ 0.24
ERCC3-207ENST00000490062 PTPRQQ9UMZ3 2332 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 TMEM120BA0PK00 339 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 SRRM3A6NNA2 597 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 C9J4A7 227 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 EFSO43281 561 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 SCELO95171 688 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 LIFP15018 202 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 F8A1P23610 371 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 PTPN4P29074 926 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 HNRNPH1P31943 449 aaKnown RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 DLSTP36957 453 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 TSFMP43897 325 aaKnown RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 AVPR1BP47901 424 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 CYP4F2P78329 520 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 PHEXP78562 749 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 CUL3Q13618 768 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 RBBP7Q16576 425 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 CFAP157Q5JU67 520 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 DEPDC1Q5TB30 811 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 C1orf189Q5VU69 101 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 ADNP2Q6IQ32 1131 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 FAM199XQ6PEV8 388 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 RNF165Q6ZSG1 346 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 SYVN1Q86TM6 617 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 PDSS2Q86YH6 399 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 CCNYL1Q8N7R7 359 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 OR2L5Q8NG80 312 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 SREK1Q8WXA9 508 aaKnown RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 CMTM7Q96FZ5 175 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 MACROD1Q9BQ69 325 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 GPN2Q9H9Y4 310 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 IFT80Q9P2H3 777 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 NXT1Q9UKK6 140 aaKnown RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 SNX6Q9UNH7 406 aa16.55■□□□□ 0.24
ERCC3-207ENST00000490062 FARSAQ9Y285 508 aaKnown RBP16.55■□□□□ 0.24
ERCC3-207ENST00000490062 A0A0A6YYC8 382 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 HMGB1P1B2RPK0 211 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 I3L1I5 382 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 UBFD1O14562 309 aaKnown RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 ATP8B1O43520 1251 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 KLF7O75840 302 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 KLHL18O94889 574 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 OR4F21O95013 312 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 SEMA3DO95025 777 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 SNUPNO95149 360 aaKnown RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 CYC1P08574 325 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 HSD3B1P14060 373 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 TSPAN8P19075 237 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 IL10P22301 178 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 HSD3B2P26439 372 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 RPS15P62841 145 aaKnown RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 TTMPQ5BVD1 217 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 BROXQ5VW32 411 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 KHDRBS2Q5VWX1 349 aaKnown RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 ABHD17CQ6PCB6 329 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 CHSY3Q70JA7 882 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 NACC2Q96BF6 587 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 NAF1Q96HR8 494 aaKnown RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 QRFPRQ96P65 431 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 MECRQ9BV79 373 aa16.54■□□□□ 0.24
ERCC3-207ENST00000490062 NPLQ9BXD5 320 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-207ENST00000490062 REXO4Q9GZR2 422 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms