RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TSLPQ969D9 159 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 TBC1D20Q96BZ9 403 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 C5orf34Q96MH7 638 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 OR1F2PQ96R84 312 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 TAAR6Q96RI8 345 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 PELI2Q9HAT8 420 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 KCNK13Q9HB14 408 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 OLAHQ9NV23 265 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 WHRNQ9P202 907 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 TEKT2Q9UIF3 430 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 DOCK10Q96BY6 2186 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 MDC1Q14676 2089 aaKnown RBP11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 OR5H15A6NDH6 313 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 MAGEB17A8MXT2 336 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 FAM227AF5H4B4 570 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 PHGDHO43175 533 aaKnown RBP11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 LRRTM2O43300 516 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 H2AFYO75367 372 aaKnown RBP11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 WDR47O94967 919 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 CLDN1O95832 211 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 FHP07954 510 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 CASQ1P31415 396 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 HNMTP50135 292 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 OR4D2P58180 307 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 BTG2P78543 158 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 POU4F1Q01851 419 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 HYAL2Q12891 473 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 USP10Q14694 798 aaKnown RBP11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 TOR1AIP1Q5JTV8 583 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 ACER2Q5QJU3 275 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 PAPD4Q6PIY7 484 aaKnown RBP11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 SLCO4C1Q6ZQN7 724 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 ADAMTSL2Q86TH1 951 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 BEST3Q8N1M1 668 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 TRPV3Q8NET8 790 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 SUN3Q8TAQ9 357 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 M1APQ8TC57 530 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 CREB3L4Q8TEY5 395 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 RHBDF1Q96CC6 855 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 SLX1AQ9BQ83 275 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC6A16Q9GZN6 736 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 DERL2Q9GZP9 239 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 RNF32Q9H0A6 362 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 RHBGQ9H310 441 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 POPDC3Q9HBV1 291 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 GRHL1Q9NZI5 618 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 TXNDC16Q9P2K2 825 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 NUP210LQ5VU65 1888 aa11.23□□□□□ -0.61
CCHCR1-215ENST00000488920 TCRBV9S1A1TA0A576 114 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 EIF3HO15372 352 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 MAN1A2O60476 641 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 PRAMEF2O60811 474 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 WISP3O95389 354 aaPredicted RBP11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 CCDC166P0CW27 439 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 SMIM10L1P0DMW3 83 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 C1GALT1C1LP0DN25 315 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 MYBL2P10244 700 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 GNAZP19086 355 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 COL8A1P27658 744 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 PLTPP55058 493 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 KCNK10P57789 538 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 GPX6P59796 221 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 SKP1P63208 163 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 SPTAN1Q13813 2472 aaKnown RBP11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 TGFBIQ15582 683 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 TRADDQ15628 312 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 EXT1Q16394 746 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 FBXO48Q5FWF7 155 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 ZNF324BQ6AW86 544 aaPredicted RBP11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 H3F3CQ6NXT2 135 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 SYT10Q6XYQ8 523 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 MAMDC2Q7Z304 686 aaPredicted RBP11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 CNTRLQ7Z7A1 2325 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 GPSM1Q86YR5 675 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 CDKL2Q92772 493 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 TSPAN17Q96FV3 270 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 SMIM10Q96HG1 83 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 ZNF354BQ96LW1 612 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 PTCHD1Q96NR3 888 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 LPAR4Q99677 370 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 NPAS2Q99743 824 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 CPNE1Q99829 537 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 AICDAQ9GZX7 198 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 MMP25Q9NPA2 562 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 ANKRD10Q9NXR5 420 aa11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 UTP11Q9Y3A2 253 aaKnown RBP11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCHCR1-215ENST00000488920 URADA6NGE7 173 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 FAM159BA6NKW6 160 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 C4orf51C9J302 202 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 TAPBPO15533 448 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 PRMT3O60678 531 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 FAM155BO75949 473 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 RASAL1O95294 804 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 SERPINA6P08185 405 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 STMN1P16949 149 aa11.21□□□□□ -0.61
CCHCR1-215ENST00000488920 MAOAP21397 527 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms