RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PTGER4P35408 488 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 HSD17B3P37058 310 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 CETN2P41208 172 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 CLK1P49759 484 aaKnown RBP3.78□□□□□ -1.8
ITGB1-214ENST00000488427 TAF10Q12962 218 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 RASA2Q15283 850 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 NPTX1Q15818 432 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 C14orf177Q52M58 125 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 PHLDA2Q53GA4 152 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 OR4A47Q6IF82 309 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 BHLHB9Q6PI77 547 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 LACC1Q8IV20 430 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 MMD2Q8IY49 270 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 XXYLT1Q8NBI6 393 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 VANGL1Q8TAA9 524 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-214ENST00000488427 PGAP3Q96FM1 320 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-214ENST00000488427 FAM20AQ96MK3 541 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 DGCR6LQ9BY27 220 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 TXLNGYQ9BZA5 131 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 GPR88Q9GZN0 384 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 NYXQ9GZU5 481 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 C11orf49Q9H6J7 331 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 GSN-AS1Q9NRJ2 163 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 ERAP1Q9NZ08 941 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 PPP1R3CQ9UQK1 317 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 DNAH14Q0VDD8 3507 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 ABCA12Q86UK0 2595 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 NCAPD2Q15021 1401 aa3.78□□□□□ -1.8
ITGB1-214ENST00000488427 RTL1A6NKG5 1358 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 ECM29Q5VYK3 1845 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 ITPR3Q14573 2671 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 MSGN1A6NI15 193 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 TRIM77I1YAP6 450 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 P4HA2O15460 535 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF821O75541 412 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 LUC7L3O95232 432 aaKnown RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 ATP5BP06576 529 aaKnown RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 CCDC175P0C221 793 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 GP1BBP13224 206 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 PSMA3P25788 255 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 HLA-FP30511 346 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 VAMP7P51809 220 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 GUCY2DQ02846 1103 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 RBPJQ06330 500 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF415Q09FC8 603 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 VEZF1Q14119 521 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 HERC3Q15034 1050 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 MTHFSDQ2M296 383 aaKnown RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 KLHL26Q53HC5 615 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 TCTE1Q5JU00 501 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 SPDYCQ5MJ68 293 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 CLEC4GQ6UXB4 293 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 RBPMS2Q6ZRY4 209 aaKnown RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 CCDC186Q7Z3E2 898 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 LRRTM1Q86UE6 522 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 TLK2Q86UE8 772 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 NBPF5PQ86XG9 351 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 RASGEF1AQ8N9B8 481 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 KCTD6Q8NC69 237 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 OR5T2Q8NGG2 359 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 RMDN1Q96DB5 314 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 CNDP2Q96KP4 475 aaKnown RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 RMDN2Q96LZ7 410 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 NSMCE3Q96MG7 304 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF599Q96NL3 588 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 FEVQ99581 238 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 LPAR4Q99677 370 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 SLC25A23Q9BV35 468 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 WWTR1Q9GZV5 400 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 GFRA4Q9GZZ7 299 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 Q9N2K0 584 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 MYNNQ9NPC7 610 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 ANKEF1Q9NU02 776 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 PA2G4Q9UQ80 394 aaKnown RBP3.77□□□□□ -1.81
ITGB1-214ENST00000488427 TMED3Q9Y3Q3 217 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 SELENOKQ9Y6D0 94 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 MYO15AQ9UKN7 3530 aa3.77□□□□□ -1.81
ITGB1-214ENST00000488427 A0A1W2PP64 1363 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 VPS13AQ96RL7 3174 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 CHD9Q3L8U1 2897 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 TRAV24A0A0B4J272 114 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 C15orf61A6NNL5 157 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 H7C423 109 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 PTGESO14684 152 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 CPT2P23786 658 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 RPS12P25398 132 aaKnown RBP3.76□□□□□ -1.81
ITGB1-214ENST00000488427 HSPA4P34932 840 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 KRT20P35900 424 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 B3GALT5-AS1P59052 145 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 ILF2Q12905 390 aaKnown RBP3.76□□□□□ -1.81
ITGB1-214ENST00000488427 TRAP1Q12931 704 aaKnown RBP3.76□□□□□ -1.81
ITGB1-214ENST00000488427 TOMM20Q15388 145 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 KYNUQ16719 465 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 FGD3Q5JSP0 725 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 UGT3A1Q6NUS8 523 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 TMEM207Q6UWW9 146 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 ZNF497Q6ZNH5 498 aa3.76□□□□□ -1.81
ITGB1-214ENST00000488427 PHLDB2Q86SQ0 1253 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms