RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 KIAA1024LP59773 190 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 GUCY2DQ02846 1103 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 PPP2R5CQ13362 524 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 ITGA9Q13797 1035 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 TMEM132DQ14C87 1099 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 ACKR1Q16570 336 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 AARDQ4LEZ3 155 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 ARMCX4Q5H9R4 360 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 AGAP6Q5VW22 663 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 DHRS11Q6UWP2 260 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 HOGA1Q86XE5 327 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 TDHQ8IZJ6 230 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 DCLK2Q8N568 766 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 LPCAT1Q8NF37 534 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 PSMA8Q8TAA3 256 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 MRGPRDQ8TDS7 321 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 SMAP2Q8WU79 429 aaPredicted RBP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 BCL2L2Q92843 193 aaPredicted RBP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 AZIN2Q96A70 460 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 PDLIM5Q96HC4 596 aaKnown RBP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 GMPPAQ96IJ6 420 aaPredicted RBP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 MAGED4Q96JG8 741 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 NECTIN4Q96NY8 510 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 PRMT1Q99873 361 aaKnown RBP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 TDRD1Q9BXT4 1180 aaKnown RBP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 SLC39A8Q9C0K1 460 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 DPEP2Q9H4A9 486 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 AKIRIN1Q9H9L7 192 aaPredicted RBP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 MID1IP1Q9NPA3 183 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 PNPLA3Q9NST1 481 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 TMOD3Q9NYL9 352 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 HACD3Q9P035 362 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 FBXW2Q9UKT8 454 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 SELENOKQ9Y6D0 94 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 NPHP3Q7Z494 1330 aa3.08□□□□□ -1.92
SNRNP27-204ENST00000487029 C2orf92A0A1B0GVN3 265 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 MEIOCA2RUB1 952 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 H0YIG0 161 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 DDX39AO00148 427 aaKnown RBP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SAP30O75446 220 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 GRAP2O75791 330 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 AKAP3O75969 853 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 LETM1O95202 739 aaPredicted RBP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 PNPP00491 289 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SBK2P0C263 348 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SRD5A2P31213 254 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SERPINH1P50454 418 aaKnown RBP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SNRPD1P62314 119 aaKnown RBP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 CSNK2BP67870 215 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 FKBP1BP68106 108 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SLC34A1Q06495 639 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 ACTN3Q08043 901 aaPredicted RBP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 RPA4Q13156 261 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 TRA2AQ13595 282 aaKnown RBP eCLIP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 EFTUD2Q15029 972 aaKnown RBP eCLIP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 RPS6KA1Q15418 735 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SGCBQ16585 318 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 PRAMEF8Q5VWM4 474 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 PWWP2BQ6NUJ5 590 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 ARHGAP11AQ6P4F7 1023 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 FIP1L1Q6UN15 594 aaKnown RBP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SIGLEC15Q6ZMC9 328 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 MACC1Q6ZN28 852 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 Q6ZSR9 355 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 C5orf24Q7Z6I8 188 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 PTAR1Q7Z6K3 402 aaPredicted RBP3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 TMEM99Q8N816 258 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 TCEANCQ8N8B7 351 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 NAT8LQ8N9F0 302 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 MAPK15Q8TD08 544 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 SAP25Q8TEE9 199 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 NXPE2Q96DL1 559 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 NEDD4LQ96PU5 975 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 OSBPL8Q9BZF1 889 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 WDR13Q9H1Z4 485 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF696Q9H7X3 374 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 ATAD3AQ9NVI7 634 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 POLKQ9UBT6 870 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 NCKAP1Q9Y2A7 1128 aa3.07□□□□□ -1.92
SNRNP27-204ENST00000487029 A0A087WZ39 114 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 A0A1W2PR80 420 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 MAGEB16A2A368 324 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 C15orf61A6NNL5 157 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 M0R296 226 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 CACNB4O00305 520 aaPredicted RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 SLC1A7O00341 560 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 MT-ND2P03891 347 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF883P0CG24 379 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 HLA-DPA1P20036 260 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 HLA-FP30511 346 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 SOX3P41225 446 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 NR0B1P51843 470 aaKnown RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ATP12AP54707 1039 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 XGP55808 180 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ERVK11-1P61568 191 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 SLC3A1Q07837 685 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 NPRL3Q12980 569 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 CDH18Q13634 790 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms