RNA–Protein interactions for RNA: ENST00000485943.1

USP40-216, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-216ENST00000485943 GTF2H2CQ6P1K8 395 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 MED27Q6P2C8 311 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 SHISA6Q6ZSJ9 500 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 CHSY3Q70JA7 882 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 LCA5Q86VQ0 697 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 SLC22A9Q8IVM8 553 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 OR4N4Q8N0Y3 316 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 RIBC1Q8N443 379 aaPredicted RBP7.65□□□□□ -1.18
USP40-216ENST00000485943 PTGR2Q8N8N7 351 aaPredicted RBP7.65□□□□□ -1.18
USP40-216ENST00000485943 PDPRQ8NCN5 879 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 ACMSDQ8TDX5 336 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 DCAKDQ8WVC6 231 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 TM9SF4Q92544 642 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 ESAMQ96AP7 390 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 FKBP10Q96AY3 582 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 ZNF837Q96EG3 531 aaPredicted RBP7.65□□□□□ -1.18
USP40-216ENST00000485943 MAGEB10Q96LZ2 347 aaPredicted RBP7.65□□□□□ -1.18
USP40-216ENST00000485943 SMC6Q96SB8 1091 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 CD244Q9BZW8 370 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 ROGDIQ9GZN7 287 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 PRORYQ9H606 182 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 MKKSQ9NPJ1 570 aaPredicted RBP7.65□□□□□ -1.18
USP40-216ENST00000485943 SEMA3GQ9NS98 782 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 SCN3AQ9NY46 2000 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 ADGRE2Q9UHX3 823 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 ZFP69BQ9UJL9 534 aa7.65□□□□□ -1.18
USP40-216ENST00000485943 AKAP13Q12802 2813 aa7.65□□□□□ -1.19
USP40-216ENST00000485943 A6NL46 340 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 CLDN4O14493 209 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 EREGO14944 169 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 RGS16O15492 202 aaPredicted RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 ERI3O43414 337 aaKnown RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 DYRK3O43781 588 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 B3GALT2O43825 422 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 PRICKLE3O43900 615 aaPredicted RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 SASH3O75995 380 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 SUPT7LO94864 414 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 OTCP00480 354 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 ALDOAP04075 364 aaKnown RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 ITGA3P26006 1051 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 EEF1DP29692 281 aaKnown RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 ECHS1P30084 290 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 HMOX2P30519 316 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 SERPINB1P30740 379 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 AHRP35869 848 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 HSD17B3P37058 310 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 BCL6P41182 706 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 EMP2P54851 167 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 POLE2P56282 527 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 TIAL1Q01085 375 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP40-216ENST00000485943 RELAQ04206 551 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 PWP1Q13610 501 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 FAM53BQ14153 422 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 PPP1R3AQ16821 1122 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 UGT8Q16880 541 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 AP5B1Q2VPB7 878 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 KRT71Q3SY84 523 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 TUBB8Q3ZCM7 444 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 CCDC153Q494R4 210 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 C6orf163Q5TEZ5 329 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 ATG9BQ674R7 924 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 FAAH2Q6GMR7 532 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 ZNF425Q6IV72 752 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 FBXO42Q6P3S6 717 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 MED25Q71SY5 747 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 OVCH1Q7RTY7 1134 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 ISCA2Q86U28 154 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 CCNYL1Q8N7R7 359 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 TMEM102Q8N9M5 508 aaPredicted RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 LRRN4CLQ8ND94 238 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 OR2Y1Q8NGV0 311 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 FLVCR1-AS1Q8TAF5 88 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 C9orf43Q8TAL5 461 aaPredicted RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 EPS8L3Q8TE67 593 aaKnown RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 CRELD1Q96HD1 420 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 UBXN10Q96LJ8 280 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 GBP5Q96PP8 586 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 OR2A5Q96R48 311 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 SLC25A23Q9BV35 468 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 PITHD1Q9GZP4 211 aaPredicted RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 REXO4Q9GZR2 422 aaKnown RBP7.64□□□□□ -1.19
USP40-216ENST00000485943 ELOVL6Q9H5J4 265 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 IPPKQ9H8X2 491 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 ANKZF1Q9H8Y5 726 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 WDR41Q9HAD4 459 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 NMRK1Q9NWW6 199 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 AHSPQ9NZD4 102 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 HCN3Q9P1Z3 774 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 FETUBQ9UGM5 382 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 C3orf18Q9UK00 162 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 MKL2Q9ULH7 1088 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 GRID1Q9ULK0 1009 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 PCDHGA6Q9Y5G7 932 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 SEC16AO15027 2179 aa7.64□□□□□ -1.19
USP40-216ENST00000485943 CCDC88CQ9P219 2028 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 KCNE1BA0A087WTH5 132 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ZNF860A6NHJ4 632 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 H0YIG0 161 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 SGK494L7N484 410 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 PCDH17O14917 1159 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms