RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 TGIF2Q9GZN2 237 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 RHBGQ9H310 441 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 IPPKQ9H8X2 491 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZBTB26Q9HCK0 441 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 MKKSQ9NPJ1 570 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 HCN3Q9P1Z3 774 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 LGALS13Q9UHV8 139 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 PCSK5Q92824 1860 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 SPTBP11277 2137 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 LRIT2A6NDA9 550 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ANKDD1BA6NHY2 528 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ARGFXA6NJG6 315 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 DNAJB6O75190 326 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 GLRA3O75311 464 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 JRKO75564 520 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 DNAJB5O75953 348 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 SMIM10L1P0DMW3 83 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 KRT4P19013 534 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 MMP11P24347 488 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 CCR10P46092 362 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 PIK3CGP48736 1102 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 EFNA3P52797 238 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 RAB8AP61006 207 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 CHAF1BQ13112 559 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 HIST2H2ACQ16777 129 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ADPRMQ3LIE5 342 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 HIST2H2AA3Q6FI13 130 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 MED27Q6P2C8 311 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ABHD13Q7L211 337 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 C4orf33Q8N1A6 199 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 RIBC1Q8N443 379 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 L3MBTL4Q8NA19 623 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 OR7G3Q8NG95 312 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZNF483Q8TF39 744 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 MS4A6EQ96DS6 147 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 SMIM10Q96HG1 83 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 CDK15Q96Q40 435 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ARHGAP9Q9BRR9 750 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 C1QTNF3Q9BXJ4 246 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 TRIM55Q9BYV6 548 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ROPN1BQ9BZX4 212 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 SEMA4CQ9C0C4 833 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 NOL11Q9H8H0 719 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ACTR8Q9H981 624 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ROPN1Q9HAT0 212 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 ACSS2Q9NR19 701 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 C14orf105Q9NVL8 296 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 DCDC2Q9UHG0 476 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 C3orf18Q9UK00 162 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 FER1L5A0AVI2 2057 aa12.85□□□□□ -0.35
SOX2-OT-209ENST00000485035 A0A0G2JN53 185 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 A0A1B0GTL3 188 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 URADA6NGE7 173 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 IDSB3KWA1 339 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 G3V2L1 256 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 MASP2O00187 686 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 PPP6CO00743 305 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 SOCS6O14544 535 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 PLIN3O60664 434 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 UGDHO60701 494 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 BMP10O95393 424 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 PROCP04070 461 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 PCNAP12004 261 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 TAC1P20366 129 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 ATP5F1P24539 256 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 CRHR1P34998 444 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 XCR1P46094 333 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 STXBP1P61764 594 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 HERVK_113P63132 956 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 OLR1P78380 273 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 SLC18A2Q05940 514 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 TRAF3Q13114 568 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 LIPJQ5W064 366 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 MYLK4Q86YV6 388 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 APLFQ8IW19 511 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 RNF175Q8N4F7 328 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 OR51Q1Q8NH59 317 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZNF473Q8WTR7 871 aaKnown RBP12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 UBE2E3Q969T4 207 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 GAL3ST3Q96A11 431 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 TMEM237Q96Q45 408 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 TMEM109Q9BVC6 243 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 ERVK-6Q9BXR3 956 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 SEMA3GQ9NS98 782 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 P4HTMQ9NXG6 502 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 RNF11Q9Y3C5 154 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
SOX2-OT-209ENST00000485035 H0YIV9 168 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 AGPSO00116 658 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 COPEO14579 308 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 ERI3O43414 337 aaKnown RBP12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 TSPAN8P19075 237 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 CCT5P48643 541 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 CCNG1P51959 295 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 CDH13P55290 713 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 ZNF844Q08AG5 666 aa12.83□□□□□ -0.36
SOX2-OT-209ENST00000485035 KCNAB2Q13303 367 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms