RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 RDH16O75452 317 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CLEC3AO75596 197 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KLF7O75840 302 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 FURINP09958 794 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 FAM87AP0C7U9 286 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KRT4P19013 534 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 RAB8AP61006 207 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KLC1Q07866 573 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ATP1A4Q13733 1029 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 DDX39BQ13838 428 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 LY6DQ14210 128 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SYT16Q17RD7 645 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CCDC153Q494R4 210 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MINDY4Q4G0A6 757 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 VWA2Q5GFL6 755 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 IRAK1BP1Q5VVH5 260 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 LIPJQ5W064 366 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 GRHL2Q6ISB3 625 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MRGPREQ86SM8 312 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SLC22A9Q8IVM8 553 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 EXD3Q8N9H8 876 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 OR51Q1Q8NH59 317 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 METTL21AQ8WXB1 218 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 GAL3ST3Q96A11 431 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CCDC126Q96EE4 140 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 WDR34Q96EX3 536 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MAGEB10Q96LZ2 347 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SPSB2Q99619 263 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SEMA4CQ9C0C4 833 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 REXO4Q9GZR2 422 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NOL11Q9H8H0 719 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SEMA4BQ9NPR2 832 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TMEM216Q9P0N5 145 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ADGRE2Q9UHX3 823 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MID2Q9UJV3 735 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 C3orf18Q9UK00 162 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 RAB21Q9UL25 225 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 GRID1Q9ULK0 1009 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PCDHGA11Q9Y5H2 935 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ATRXP46100 2492 aa11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MDC1Q14676 2089 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SEC16AO15027 2179 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 LRRC14BA6NHZ5 514 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 A8MT66 165 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MKRN2OSH3BPM6 223 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 E2F3O00716 465 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ERI3O43414 337 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 UGDHO60701 494 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 GALR3O60755 368 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SUPT7LO94864 414 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CLDN9O95484 217 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 OTCP00480 354 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PRB1P04280 392 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 UQCRHP07919 91 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MYL2P10916 166 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 JAK1P23458 1154 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MMP11P24347 488 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ATP5F1P24539 256 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 XCR1P46094 333 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 RAP1GDS1P52306 607 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 EMP2P54851 167 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 BTN3A2P78410 334 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KCNAB2Q13303 367 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CPSF6Q16630 551 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KRT71Q3SY84 523 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CHSY3Q70JA7 882 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MED25Q71SY5 747 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PRSS41Q7RTY9 318 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 C4orf33Q8N1A6 199 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MREGQ8N565 214 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 AMER3Q8N944 861 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 TMEM102Q8N9M5 508 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SRFBP1Q8NEF9 429 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ADAMTS17Q8TE56 1095 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 UTP15Q8TED0 518 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CREB3L4Q8TEY5 395 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MZB1Q8WU39 189 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 NACC2Q96BF6 587 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PEX11GQ96HA9 241 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SMC6Q96SB8 1091 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 SLC6A16Q9GZN6 736 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ROGDIQ9GZN7 287 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ING2Q9H160 280 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ADNPQ9H2P0 1102 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 C19orf25Q9UFG5 118 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MKL2Q9ULH7 1088 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 STK38LQ9Y2H1 464 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 KCNMB2Q9Y691 235 aa11.11□□□□□ -0.63
CDK5RAP2-217ENST00000484546 IGLV3-12A0A075B6K2 115 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 VSTM2BA6NLU5 285 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 IDSB3KWA1 339 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 AGPSO00116 658 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 PCDH17O14917 1159 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 B3GALT2O43825 422 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 CNOT3O75175 753 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 C1QL1O75973 258 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 WFS1O76024 890 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 UMODP07911 640 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 MYZAPP0CAP1 466 aa11.1□□□□□ -0.63
CDK5RAP2-217ENST00000484546 ACPPP15309 386 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms