RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 EIF2B3Q9NR50 452 aaKnown RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 SOX13Q9UN79 622 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 CAPN6Q9Y6Q1 641 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 IGKV3D-11A0A0A0MRZ8 115 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 TMEM200CA6NKL6 621 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 ZNF839A8K0R7 811 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 A8MUA0 341 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 H3BMM5 538 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 CDK2AP1O14519 115 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 PRKNO60260 465 aaPredicted RBP12.03□□□□□ -0.48
UBR4-213ENST00000483922 CDC40O60508 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBR4-213ENST00000483922 GALR3O60755 368 aaPredicted RBP12.03□□□□□ -0.48
UBR4-213ENST00000483922 B4GALT2O60909 372 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 CTAG2O75638 210 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 MPC1LP0DKB6 136 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 MAOAP21397 527 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 GPR143P51810 404 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 TBPL1P62380 186 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 MEF2AQ02078 507 aaPredicted RBP12.03□□□□□ -0.48
UBR4-213ENST00000483922 CTBP1Q13363 440 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 TMEM211Q6ICI0 200 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 SLC13A5Q86YT5 568 aaPredicted RBP12.03□□□□□ -0.48
UBR4-213ENST00000483922 OTUD6BQ8N6M0 293 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 POGLUT1Q8NBL1 392 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 MFSD9Q8NBP5 474 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 CAMKVQ8NCB2 501 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 APCDD1LQ8NCL9 501 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 RND1Q92730 232 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 TBC1D20Q96BZ9 403 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 THAP11Q96EK4 314 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 OR1F2PQ96R84 312 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 SPNS1Q9H2V7 528 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 PNPLA3Q9NST1 481 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 PAK5Q9P286 719 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 DHRS7Q9Y394 339 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 L3MBTL1Q9Y468 752 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 CLDN16Q9Y5I7 305 aa12.03□□□□□ -0.48
UBR4-213ENST00000483922 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 C4orf51C9J302 202 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 TFECO14948 347 aaPredicted RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 ZBTB14O43829 449 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 HRH2P25021 359 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 TAS2R50P59544 299 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 HYAL2Q12891 473 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 GXYLT1Q4G148 440 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 DEFB134Q4QY38 66 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 XKR6Q5GH73 641 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 CES4AQ5XG92 561 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 KIAA0930Q6ICG6 404 aaPredicted RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 NEPROQ6NW34 567 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 UBE2R2Q712K3 238 aaPredicted RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 CPNE9Q8IYJ1 553 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 CYP4X1Q8N118 509 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 OR4K1Q8NGD4 311 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 CD200R1Q8TD46 325 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 PTCHD1Q96NR3 888 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 PANX2Q96RD6 677 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 GPR21Q99679 349 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 SMR3AQ99954 134 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 AICDAQ9GZX7 198 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 ATG10Q9H0Y0 220 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 TP63Q9H3D4 680 aaPredicted RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 CCDC177Q9NQR7 707 aaPredicted RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 FBXO6Q9NRD1 293 aaPredicted RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 BFARQ9NZS9 450 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 KLHL42Q9P2K6 505 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 PDE10AQ9Y233 779 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 KLF13Q9Y2Y9 288 aaPredicted RBP12.02□□□□□ -0.49
UBR4-213ENST00000483922 FAM215AQ9Y5M1 114 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 LIPGQ9Y5X9 500 aa12.02□□□□□ -0.49
UBR4-213ENST00000483922 A0A0G2JMM0 328 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 A0A0G2JNJ9 132 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 A0A1W2PPB8 328 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 A0A1W2PRS3 328 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 TCRBV16S1A1N1A0A5B0 115 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 SAGE2PA6NJ88 616 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 KIR3DP1A8MWS1 328 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 E5RI56 91 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 KLRC4-KLRK1H3BQV0 150 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 TGFBR3LH3BV60 316 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 PROM1O43490 865 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 PRMT3O60678 531 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 SMIM10L1P0DMW3 83 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 CDH1P12830 882 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 OGNP20774 298 aaKnown RBP12.01□□□□□ -0.49
UBR4-213ENST00000483922 IL10P22301 178 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 ADH7P40394 386 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 CEBPEQ15744 281 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 RNF187Q5TA31 235 aaPredicted RBP12.01□□□□□ -0.49
UBR4-213ENST00000483922 AGTRAPQ6RW13 159 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 KIAA0408Q6ZU52 694 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 CAND1Q86VP6 1230 aaKnown RBP12.01□□□□□ -0.49
UBR4-213ENST00000483922 TMEM139Q8IV31 216 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 EID3Q8N140 333 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 AGGF1Q8N302 714 aaeCLIP12.01□□□□□ -0.49
UBR4-213ENST00000483922 OR5M9Q8NGP3 310 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 SMIM10Q96HG1 83 aa12.01□□□□□ -0.49
UBR4-213ENST00000483922 OR4K3Q96R72 315 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms