RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 RNF175Q8N4F7 328 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 CCDC63Q8NA47 563 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 OR52B6Q8NGF0 335 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 OR5T3Q8NGG3 340 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 OR2Y1Q8NGV0 311 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 STT3BQ8TCJ2 826 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 ATP6V1E2Q96A05 226 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 MVB12AQ96EY5 273 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 ZIM3Q96PE6 472 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 TMEM237Q96Q45 408 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 RBCK1Q9BYM8 510 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 SLC24A3Q9HC58 644 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 ZBTB26Q9HCK0 441 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 SEMA4BQ9NPR2 832 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 COPG2Q9UBF2 871 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF282Q9UDV7 671 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 CDC14AQ9UNH5 594 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 RNF11Q9Y3C5 154 aa9.74□□□□□ -0.85
HDAC6-222ENST00000478095 SNRNP200O75643 2136 aaKnown RBP9.74□□□□□ -0.85
HDAC6-222ENST00000478095 CACNA1BQ00975 2339 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 A0A1B0GTL3 188 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CCDC151A5D8V7 595 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ANKDD1BA6NHY2 528 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 G3V2L1 256 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 PPP6CO00743 305 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 PRPF4O43172 522 aaKnown RBP eCLIP9.73□□□□□ -0.855e-6■□□□□ 8.1
HDAC6-222ENST00000478095 PLIN3O60664 434 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 DNAJB6O75190 326 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 JRKO75564 520 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 SUPT7LO94864 414 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 NSA2O95478 260 aaKnown RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 TBX6O95947 436 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ONECUT2O95948 504 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ALBP02768 609 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 SERPINA6P08185 405 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ZGLP1P0C6A0 271 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 MYL2P10916 166 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CREB1P16220 341 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ALOX12P18054 663 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ATP5F1P24539 256 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CRHR1P34998 444 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CASP2P42575 452 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CCT5P48643 541 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CCNG1P51959 295 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 HERVK_113P63132 956 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 OCA2Q04671 838 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 SLC18A2Q05940 514 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 KLC1Q07866 573 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CHAF1BQ13112 559 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 LAPTM5Q13571 262 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ATP1A4Q13733 1029 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 E2F2Q14209 437 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 HERC3Q15034 1050 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 RBBP7Q16576 425 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CPSF6Q16630 551 aaKnown RBP eCLIP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 TBR1Q16650 682 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 UNC50Q53HI1 259 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF678Q5SXM1 525 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CEP85LQ5SZL2 805 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 METTL2BQ6P1Q9 378 aaKnown RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ABHD13Q7L211 337 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 AFAP1L2Q8N4X5 818 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 TTLQ8NG68 377 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 OR7G3Q8NG95 312 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ADAMTS17Q8TE56 1095 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 UTP15Q8TED0 518 aaKnown RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 TRPC4APQ8TEL6 797 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 PPP4R1Q8TF05 950 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF483Q8TF39 744 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 TTC9Q92623 222 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 MIEF2Q96C03 454 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 APOPT1Q96IL0 206 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 MESP1Q9BRJ9 268 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 TMEM109Q9BVC6 243 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 ERVK-6Q9BXR3 956 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 PITHD1Q9GZP4 211 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 SLC26A1Q9H2B4 701 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 CENPHQ9H3R5 247 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 NT5DC2Q9H857 520 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 NXT1Q9UKK6 140 aaKnown RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 GRID1Q9ULK0 1009 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 MAN2B2Q9Y2E5 1009 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 MAP4K5Q9Y4K4 846 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 SLC22A7Q9Y694 548 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 DSPP15924 2871 aaKnown RBP9.73□□□□□ -0.85
HDAC6-222ENST00000478095 PTPRQQ9UMZ3 2332 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 SPTBP11277 2137 aa9.73□□□□□ -0.85
HDAC6-222ENST00000478095 URADA6NGE7 173 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ARGFXA6NJG6 315 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 VSTM2BA6NLU5 285 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 H0YIG0 161 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 MASP2O00187 686 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 SAP18O00422 153 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 RGS16O15492 202 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ERI3O43414 337 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 GALR3O60755 368 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 CLEC3AO75596 197 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 CLDN9O95484 217 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms