RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 FASTKD3Q14CZ7 662 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CHI3L2Q15782 390 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CCL14Q16627 93 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ZNF484Q5JVG2 852 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RABGAP1LQ5R372 815 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 GRTP1Q5TC63 336 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 STEAP4Q687X5 459 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 EPGNQ6UW88 154 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PACS1Q6VY07 963 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ZNF554Q86TJ5 538 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PRUNE1Q86TP1 453 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ZNF410Q86VK4 478 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PGAM4Q8N0Y7 254 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 NDUFAF2Q8N183 169 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 MUC20Q8N307 709 aaPredicted RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 BBS5Q8N3I7 341 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RFLNBQ8N5W9 214 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 NEXN-AS1Q8NBZ9 246 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RNF149Q8NC42 400 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PPTC7Q8NI37 304 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SPATA18Q8TC71 538 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SLC26A7Q8TE54 656 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 MPP4Q96JB8 637 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SERAC1Q96JX3 654 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 MCEEQ96PE7 176 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CPNE1Q99829 537 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TUBA1CQ9BQE3 449 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 ZNF670Q9BS34 389 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 CNPY3Q9BT09 278 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TCHPQ9BT92 498 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 MSTO1Q9BUK6 570 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TWSG1Q9GZX9 223 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 C2orf40Q9H1Z8 148 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SNX25Q9H3E2 840 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 EFCAB1Q9HAE3 211 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 TRPC7Q9HCX4 862 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 PTPRHQ9HD43 1115 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 G6PC2Q9NQR9 355 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RBAKQ9NYW8 714 aaPredicted RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 RSL24D1Q9UHA3 163 aaKnown RBP4.42□□□□□ -1.7
LMBR1-216ENST00000477983 POMPQ9Y244 141 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 AP4S1Q9Y587 144 aa4.42□□□□□ -1.7
LMBR1-216ENST00000477983 SF3B1O75533 1304 aaKnown RBP eCLIP4.42□□□□□ -1.72e-8■■■■■ 132.1
LMBR1-216ENST00000477983 A0A087WXM4 84 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 C15orf38-AP3S2A0A0A6YYH1 394 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 IGKV6-21A0A0C4DH24 114 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 KANSL1LA0AUZ9 987 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PLSCR5A0PG75 271 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 SH3PXD2BA1X283 911 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 TRPC5OSA6NMA1 111 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 NTN3O00634 580 aaPredicted RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 VILLO15195 856 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 NCAM2O15394 837 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PSMD3O43242 534 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 TIMM44O43615 452 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 ITM2AO43736 263 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PRPSAP2O60256 369 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 KLHL41O60662 606 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PLIN3O60664 434 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 LRCH4O75427 683 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 TOM1L1O75674 476 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 BCAS2O75934 225 aaPredicted RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 BMP10O95393 424 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 H6PDO95479 791 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 C22orf31O95567 290 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 C1QAP02745 245 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 EDN1P05305 212 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 TFAP2AP05549 437 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 POLBP06746 335 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 ZSCAN5DPP0CG00 497 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 HSPA1AP0DMV8 641 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 HSPA1BP0DMV9 641 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 HSPA8P11142 646 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 RALBP11234 206 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 VDRP11473 427 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 COX4I1P13073 169 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PORP16435 677 aaPredicted RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PSMC3P17980 439 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PGAM1P18669 254 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 ME2P23368 584 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 SPRP35270 261 aaPredicted RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 ACOT2P49753 483 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 KPNA2P52292 529 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 AIF1P55008 147 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 ABCE1P61221 599 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 NAA20P61599 178 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 MRPS5P82675 430 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 BNC1Q01954 994 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PPIDQ08752 370 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 TBL3Q12788 808 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 GRSF1Q12849 480 aaKnown RBP eCLIP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 ZBTB17Q13105 803 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 STX5Q13190 355 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 APOFQ13790 326 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 MXD4Q14582 209 aaPredicted RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 TRIP10Q15642 601 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 FASTKD1Q53R41 847 aaKnown RBP4.41□□□□□ -1.7
LMBR1-216ENST00000477983 SPANXN3Q5MJ09 141 aa4.41□□□□□ -1.7
LMBR1-216ENST00000477983 PDPK2PQ6A1A2 396 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms