RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 NELL1Q92832 810 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 OR52A5Q9H2C5 316 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 MDC1Q14676 2089 aaKnown RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 CFAP54Q96N23 3096 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 CLOCKO15516 846 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 B4GAT1O43505 415 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 BMP2P12643 396 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 PRPS1L1P21108 318 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 AK4P27144 223 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 GSSP48637 474 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 PLA2G16P53816 162 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 TMEM52BQ4KMG9 183 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 GALNT5Q7Z7M9 940 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 OTUB1Q96FW1 271 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 ZNF597Q96LX8 424 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 ADI1Q9BV57 179 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 TUBA8Q9NY65 449 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 AASSQ9UDR5 926 aa12.86□□□□□ -0.35
HDAC7-221ENST00000477203 RUVBL1Q9Y265 456 aaKnown RBP12.86□□□□□ -0.35
HDAC7-221ENST00000477203 DLGAP1O14490 977 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 DENRO43583 198 aaKnown RBP12.85□□□□□ -0.35
HDAC7-221ENST00000477203 DNTTP04053 509 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 ACADLP28330 430 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 CRATP43155 626 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 SF3B4Q15427 424 aaKnown RBP eCLIP12.85□□□□□ -0.354e-9■■■■□ 22.6
HDAC7-221ENST00000477203 CDKL4Q5MAI5 379 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 PROSER1Q86XN7 944 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 PGBD3Q8N328 593 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 OR8J3Q8NGG0 315 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 STARD8Q92502 1023 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 UCN3Q969E3 161 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 RAD51AP1Q96B01 352 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 CPPED1Q9BRF8 314 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-221ENST00000477203 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 GLOD5A6NK44 160 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 ACOX3O15254 700 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 EPN2O95208 641 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 ALPPL2P10696 532 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 POLR2IP36954 125 aaKnown RBP12.85□□□□□ -0.35
HDAC7-221ENST00000477203 WNT3P56703 355 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 ARPC4P59998 168 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 RPS26P62854 115 aaKnown RBP12.85□□□□□ -0.35
HDAC7-221ENST00000477203 GAB1Q13480 694 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 CCDC85BQ15834 202 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-221ENST00000477203 BCL7AQ4VC05 210 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 ZNF542PQ5EBM4 170 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 PERM1Q5SV97 790 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 TMIGD1Q6UXZ0 262 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 DGLUCYQ7Z3D6 616 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 HMGN2P46Q86SG4 172 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 RIMKLAQ8IXN7 391 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 ANKFN1Q8N957 763 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 OR4A15Q8NGL6 344 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 CCL4L1Q8NHW4 92 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 MAGED4Q96JG8 741 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 KCNH6Q9H252 994 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-221ENST00000477203 MAP4K5Q9Y4K4 846 aa12.85□□□□□ -0.35
HDAC7-221ENST00000477203 OR1F1O43749 312 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 RNGTTO60942 597 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 C6orf47O95873 294 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 CYP4B1P13584 511 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NKX2-5P52952 324 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 DPTQ07507 201 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NR1D2Q14995 579 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 HIST2H2ACQ16777 129 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 HIST2H2AA3Q6FI13 130 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 PPP4R4Q6NUP7 873 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NXPE4Q6UWF7 544 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NUDT18Q6ZVK8 323 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 TSACCQ96A04 125 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 C12orf43Q96C57 262 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 INSM2Q96T92 566 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 BARD1Q99728 777 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 AASDHPPTQ9NRN7 309 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NFKBIL1Q9UBC1 381 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 A0A096LPI6 279 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 H0YIV9 168 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 PRKRAO75569 313 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 CD247P20963 164 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 PTPN6P29350 595 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 RPS9P46781 194 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 CDK9P50750 372 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 NUP107P57740 925 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 DUOXA1Q1HG43 343 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 COX20Q5RI15 118 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 TMEM179BQ7Z7N9 219 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 CHERPQ8IWX8 916 aaKnown RBP12.84□□□□□ -0.35
HDAC7-221ENST00000477203 IL17RCQ8NAC3 791 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 HCAR2Q8TDS4 363 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 C9orf16Q9BUW7 83 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 OSBPL11Q9BXB4 747 aa12.84□□□□□ -0.35
HDAC7-221ENST00000477203 SLC17A9Q9BYT1 436 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms