RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SGPP1Q9BX95 441 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 REEP4Q9H6H4 257 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 SCN3BQ9NY72 215 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 PDP1Q9P0J1 537 aaPredicted RBP15.81■□□□□ 0.12
TMEM53-208ENST00000476724 SH3BP4Q9P0V3 963 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 GULP1Q9UBP9 304 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 SAMHD1Q9Y3Z3 626 aaKnown RBP15.81■□□□□ 0.12
TMEM53-208ENST00000476724 TICRRQ7Z2Z1 1910 aa15.81■□□□□ 0.12
TMEM53-208ENST00000476724 PCM1Q15154 2024 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 A0A0J9YVX5 310 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 hCG_2039718K7EN88 272 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 PLK4O00444 970 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 SUV39H1O43463 412 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 LILRB5O75023 590 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 BCL10O95999 233 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 IL12RB1P42701 662 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 TBPL1P62380 186 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 EIF4HQ15056 248 aaKnown RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 SF1Q15637 639 aaKnown RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 VTCN1Q7Z7D3 282 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 TSPYL5Q86VY4 417 aaPredicted RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 TTC29Q8NA56 475 aaPredicted RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 C11orf65Q8NCR3 313 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 SETD7Q8WTS6 366 aaKnown RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 BORCS5Q969J3 196 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 EPYCQ99645 322 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 DPH2Q9BQC3 489 aaPredicted RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 BCL7BQ9BQE9 202 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 TMEM245Q9H330 911 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 DPEP2Q9H4A9 486 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 RIBC2Q9H4K1 309 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 TRIM39Q9HCM9 518 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 GPR34Q9UPC5 381 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 TSC22D4Q9Y3Q8 395 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 GMPPBQ9Y5P6 360 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 BRWD1Q9NSI6 2320 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 SH3PXD2BA1X283 911 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 PTGES3LE9PB15 166 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 MITFO75030 526 aaPredicted RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 C1QCP02747 245 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 C9P02748 559 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 PCMT1P22061 227 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 PHEXP78562 749 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 DPTQ07507 201 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 ELOAQ14241 798 aaKnown RBP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 GALNT5Q7Z7M9 940 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 OR4A15Q8NGL6 344 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.8■□□□□ 0.12
TMEM53-208ENST00000476724 UBE2E3Q969T4 207 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 ARRDC3Q96B67 414 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 NUS1Q96E22 293 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 DOHHQ9BU89 302 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 PADI2Q9Y2J8 665 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 PCDHGB3Q9Y5G1 929 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 ATG2BQ96BY7 2078 aa15.8■□□□□ 0.12
TMEM53-208ENST00000476724 EDDM13A0A1B0GTR0 161 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF99A8MXY4 864 aaPredicted RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 SPINT1O43278 529 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 KAT7O95251 611 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 SOD1P00441 154 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 GPR1P46091 355 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 CLK3P49761 638 aaKnown RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 RAB15P59190 212 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 RBBP4Q09028 425 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 C16orf72Q14CZ0 275 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 EGFLAMQ63HQ2 1017 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 FAHD1Q6P587 224 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 ANKRD13BQ86YJ7 626 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 TRAPPC5Q8IUR0 188 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 GPR156Q8NFN8 814 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 FNDC8Q8TC99 324 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 OR8D1Q8WZ84 308 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 SGCDQ92629 289 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 MTERF3Q96E29 417 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 C7orf34Q96L11 122 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 FAM129BQ96TA1 746 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 BARD1Q99728 777 aaKnown RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 DUSP21Q9H596 190 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 CCNB1IP1Q9NPC3 277 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 KRT84Q9NSB2 600 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 KIF17Q9P2E2 1029 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 WARS2Q9UGM6 360 aaKnown RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 NDRG4Q9ULP0 352 aaKnown RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF182P17025 639 aaPredicted RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 PIK3CBP42338 1070 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 GALK1P51570 392 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 SELENOWP63302 87 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 CSNK2BP67870 215 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 KCNJ10P78508 379 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 SIM2Q14190 667 aaPredicted RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 SLBPQ14493 270 aaKnown RBP eCLIP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 IQCCQ4KMZ1 466 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 CATSPEREQ5SY80 951 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 ADNP2Q6IQ32 1131 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 KLHL35Q6PF15 583 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 ZC3H7AQ8IWR0 971 aaKnown RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 CNIH3Q8TBE1 160 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 FKBP10Q96AY3 582 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 TPD52L3Q96J77 140 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms