RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 FAM84BQ96KN1 310 aaPredicted RBP4.01□□□□□ -1.77
CD55-208ENST00000476590 ZNF385AQ96PM9 386 aaKnown RBP4.01□□□□□ -1.77
CD55-208ENST00000476590 RBP7Q96R05 134 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 NODALQ96S42 347 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 PAFAH2Q99487 392 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 CMSS1Q9BQ75 279 aaKnown RBP4.01□□□□□ -1.77
CD55-208ENST00000476590 STRA6Q9BX79 667 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 PARD6GQ9BYG4 376 aaPredicted RBP4.01□□□□□ -1.77
CD55-208ENST00000476590 TRIM54Q9BYV2 358 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 RNF32Q9H0A6 362 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 UPF3AQ9H1J1 476 aaKnown RBP4.01□□□□□ -1.77
CD55-208ENST00000476590 MMP28Q9H239 520 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 SEMA6CQ9H3T2 930 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 WDR41Q9HAD4 459 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 SLAMF7Q9NQ25 335 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.01□□□□□ -1.77
CD55-208ENST00000476590 TEX10Q9NXF1 929 aaPredicted RBP4.01□□□□□ -1.77
CD55-208ENST00000476590 SCP2D1Q9UJQ7 156 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 USP18Q9UMW8 372 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 WASF3Q9UPY6 502 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 GOLT1BQ9Y3E0 138 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 ALG6Q9Y672 507 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 FPGT-TNNI3KV9GXZ4 949 aa4.01□□□□□ -1.77
CD55-208ENST00000476590 TCRBV7S2A1N4TA0A589 114 aa4□□□□□ -1.77
CD55-208ENST00000476590 BLACEA4D250 179 aa4□□□□□ -1.77
CD55-208ENST00000476590 FAM149AA5PLN7 773 aa4□□□□□ -1.77
CD55-208ENST00000476590 C5orf52A6NGY3 159 aa4□□□□□ -1.77
CD55-208ENST00000476590 SLC15A5A6NIM6 579 aa4□□□□□ -1.77
CD55-208ENST00000476590 WASHC1A8K0Z3 465 aa4□□□□□ -1.77
CD55-208ENST00000476590 NUDT19A8MXV4 375 aa4□□□□□ -1.77
CD55-208ENST00000476590 KPNA7A9QM74 516 aa4□□□□□ -1.77
CD55-208ENST00000476590 KDM4EB2RXH2 506 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 WASH3PC4AMC7 463 aa4□□□□□ -1.77
CD55-208ENST00000476590 E9PI62 339 aa4□□□□□ -1.77
CD55-208ENST00000476590 H0YIN7 160 aa4□□□□□ -1.77
CD55-208ENST00000476590 TMEM189-UBE2V1I3L0A0 370 aa4□□□□□ -1.77
CD55-208ENST00000476590 FOXE1O00358 373 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 PDCD5O14737 125 aa4□□□□□ -1.77
CD55-208ENST00000476590 ZNF213O14771 459 aa4□□□□□ -1.77
CD55-208ENST00000476590 SEC14L5O43304 696 aa4□□□□□ -1.77
CD55-208ENST00000476590 DCXO43602 365 aa4□□□□□ -1.77
CD55-208ENST00000476590 PRKYO43930 277 aa4□□□□□ -1.77
CD55-208ENST00000476590 NPHS1O60500 1241 aa4□□□□□ -1.77
CD55-208ENST00000476590 HCN1O60741 890 aa4□□□□□ -1.77
CD55-208ENST00000476590 DPM1O60762 260 aa4□□□□□ -1.77
CD55-208ENST00000476590 MITFO75030 526 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 CYP7B1O75881 506 aa4□□□□□ -1.77
CD55-208ENST00000476590 RECQL4O94761 1208 aa4□□□□□ -1.77
CD55-208ENST00000476590 CNTN5O94779 1100 aa4□□□□□ -1.77
CD55-208ENST00000476590 ENDOD1O94919 500 aa4□□□□□ -1.77
CD55-208ENST00000476590 VAPBO95292 243 aa4□□□□□ -1.77
CD55-208ENST00000476590 ANGPTL1O95841 491 aa4□□□□□ -1.77
CD55-208ENST00000476590 CSTBP04080 98 aaKnown RBP4□□□□□ -1.77
CD55-208ENST00000476590 MPOP05164 745 aa4□□□□□ -1.77
CD55-208ENST00000476590 GALTP07902 379 aa4□□□□□ -1.77
CD55-208ENST00000476590 SLC2A1P11166 492 aa4□□□□□ -1.77
CD55-208ENST00000476590 ARSBP15848 533 aa4□□□□□ -1.77
CD55-208ENST00000476590 PRPS1L1P21108 318 aa4□□□□□ -1.77
CD55-208ENST00000476590 CTSSP25774 331 aa4□□□□□ -1.77
CD55-208ENST00000476590 ACVR2AP27037 513 aa4□□□□□ -1.77
CD55-208ENST00000476590 MSX2P35548 267 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 RPS9P46781 194 aaKnown RBP4□□□□□ -1.77
CD55-208ENST00000476590 ATXN3P54252 364 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 RAB2AP61019 212 aa4□□□□□ -1.77
CD55-208ENST00000476590 SNRPEP62304 92 aaKnown RBP4□□□□□ -1.77
CD55-208ENST00000476590 NHLH2Q02577 135 aa4□□□□□ -1.77
CD55-208ENST00000476590 SCN1BQ07699 218 aa4□□□□□ -1.77
CD55-208ENST00000476590 GPR19Q15760 415 aa4□□□□□ -1.77
CD55-208ENST00000476590 DPY19L1Q2PZI1 675 aa4□□□□□ -1.77
CD55-208ENST00000476590 AKIRIN2Q53H80 203 aa4□□□□□ -1.77
CD55-208ENST00000476590 TTC38Q5R3I4 469 aa4□□□□□ -1.77
CD55-208ENST00000476590 PRAMEF13Q5VWM6 474 aa4□□□□□ -1.77
CD55-208ENST00000476590 MAP1SQ66K74 1059 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 CIAPIN1Q6FI81 312 aa4□□□□□ -1.77
CD55-208ENST00000476590 SULT6B1Q6IMI4 303 aa4□□□□□ -1.77
CD55-208ENST00000476590 HEPHL1Q6MZM0 1159 aa4□□□□□ -1.77
CD55-208ENST00000476590 RGS7BPQ6MZT1 257 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 CDC73Q6P1J9 531 aa4□□□□□ -1.77
CD55-208ENST00000476590 HAGHLQ6PII5 290 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 VHLLQ6RSH7 139 aa4□□□□□ -1.77
CD55-208ENST00000476590 SCIMPQ6UWF3 145 aa4□□□□□ -1.77
CD55-208ENST00000476590 LRRC8DQ7L1W4 858 aa4□□□□□ -1.77
CD55-208ENST00000476590 THAP5Q7Z6K1 395 aa4□□□□□ -1.77
CD55-208ENST00000476590 CCDC190Q86UF4 302 aa4□□□□□ -1.77
CD55-208ENST00000476590 DHFR2Q86XF0 187 aa4□□□□□ -1.77
CD55-208ENST00000476590 KLBQ86Z14 1044 aa4□□□□□ -1.77
CD55-208ENST00000476590 ADHFE1Q8IWW8 467 aa4□□□□□ -1.77
CD55-208ENST00000476590 TRIM48Q8IWZ4 208 aa4□□□□□ -1.77
CD55-208ENST00000476590 STPG2Q8N412 459 aa4□□□□□ -1.77
CD55-208ENST00000476590 DNAJC22Q8N4W6 341 aa4□□□□□ -1.77
CD55-208ENST00000476590 MS4A15Q8N5U1 240 aa4□□□□□ -1.77
CD55-208ENST00000476590 SYT14Q8NB59 555 aa4□□□□□ -1.77
CD55-208ENST00000476590 NLGN2Q8NFZ4 835 aa4□□□□□ -1.77
CD55-208ENST00000476590 OR2L8Q8NGY9 312 aa4□□□□□ -1.77
CD55-208ENST00000476590 ITFG1Q8TB96 612 aa4□□□□□ -1.77
CD55-208ENST00000476590 ETNPPLQ8TBG4 499 aa4□□□□□ -1.77
CD55-208ENST00000476590 WFIKKN2Q8TEU8 576 aa4□□□□□ -1.77
CD55-208ENST00000476590 TCTEX1D2Q8WW35 142 aa4□□□□□ -1.77
CD55-208ENST00000476590 DIO2Q92813 273 aa4□□□□□ -1.77
CD55-208ENST00000476590 APBB2Q92870 758 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms