RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 WBP2Q969T9 261 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 PHF21AQ96BD5 680 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 CNOT6LQ96LI5 555 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 SORCS2Q96PQ0 1159 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 SECISBP2Q96T21 854 aaKnown RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 GPA33Q99795 319 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 UBAC1Q9BSL1 405 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 LRRC2Q9BYS8 371 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 WWTR1Q9GZV5 400 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 DPEP2Q9H4A9 486 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 Q9H8V8 135 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 WDR76Q9H967 626 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 TRPC7Q9HCX4 862 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 RDH8Q9NYR8 311 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 VPS54Q9P1Q0 977 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 KLHL8Q9P2G9 620 aaPredicted RBP3.9□□□□□ -1.79
VPS13D-207ENST00000476169 CHRNA9Q9UGM1 479 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 DAPK2Q9UIK4 370 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 FZD10Q9ULW2 581 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 PCDHA7Q9UN72 937 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 AQRO60306 1485 aaKnown RBP eCLIP3.9□□□□□ -1.798e-9■■■■■ 44.7
VPS13D-207ENST00000476169 TTC21BQ7Z4L5 1316 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 TOPBP1Q92547 1522 aa3.9□□□□□ -1.79
VPS13D-207ENST00000476169 KIAA1217Q5T5P2 1943 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 A0A0U1RQV5 110 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 A0A1B0GUL7 405 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 A0A1B0GVT2 93 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ANKRD66B4E2M5 251 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 H0Y8G0 127 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PRRG1O14668 218 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ZNF197O14709 1029 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ARPC2O15144 300 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 OGTO15294 1046 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 DCXO43602 365 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 LRP3O75074 770 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 SURF6O75683 361 aaKnown RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 SYNGR4O95473 234 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 FGF2P09038 288 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 GZMAP12544 262 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 CD38P28907 300 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PTPN4P29074 926 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 C21orf33P30042 268 aaPredicted RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PRDX2P32119 198 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 OTX2P32243 289 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 SFTPDP35247 375 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 CETN2P41208 172 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 NKX2-1P43699 371 aaPredicted RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 NR2C2P49116 596 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 TNFSF10P50591 281 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 HERV-K104P63124 156 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ROR2Q01974 943 aaKnown RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 EEF1A2Q05639 463 aaKnown RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 GPS2Q13227 327 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 KEAP1Q14145 624 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 RCN1Q15293 331 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 STX1AQ16623 288 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ODF4Q2M2E3 257 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 TMEM35AQ53FP2 167 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 NKAIN2Q5VXU1 208 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 OR4A47Q6IF82 309 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ZNF770Q6IQ21 691 aaPredicted RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ANGPTL8Q6UXH0 198 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 RAD9BQ6WBX8 426 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 COLCA1Q6ZS62 124 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 Q75L30 129 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PTOV1Q86YD1 416 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 SLC22A9Q8IVM8 553 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ZNF34Q8IZ26 560 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 CPSF7Q8N684 471 aaKnown RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 MINDY2Q8NBR6 621 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 BBOF1Q8ND07 529 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 STEAP2Q8NFT2 490 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 OR10Q1Q8NGQ4 319 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 WFIKKN2Q8TEU8 576 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PIGBQ92521 554 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PHYHIPQ92561 330 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ZNF75CPQ92670 426 aaPredicted RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PIGTQ969N2 578 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 TPD52L3Q96J77 140 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 CXorf58Q96LI9 332 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 FAM20AQ96MK3 541 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 GUCD1Q96NT3 240 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 PSKH2Q96QS6 385 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 CSF3RQ99062 836 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 URM1Q9BTM9 101 aaKnown RBP3.89□□□□□ -1.79
VPS13D-207ENST00000476169 C1QTNF7Q9BXJ2 289 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 GON7Q9BXV9 100 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 VN1R1Q9GZP7 353 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ZMYND12Q9H0C1 365 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 DPEP3Q9H4B8 488 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 POT1Q9NUX5 634 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ACOXLQ9NUZ1 547 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 AIPL1Q9NZN9 384 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 MALT1Q9UDY8 824 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 SLC12A6Q9UHW9 1150 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 ZNF804BA4D1E1 1349 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 DISP3Q9P2K9 1392 aa3.89□□□□□ -1.79
VPS13D-207ENST00000476169 POLA1P09884 1462 aaPredicted RBP3.88□□□□□ -1.79
VPS13D-207ENST00000476169 A0A1W2PRB8 838 aa3.88□□□□□ -1.79
VPS13D-207ENST00000476169 E9PBE3 544 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms