RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, human

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-211	ENST00000475728	ZNF358	Q9NW07	568 aa		13.69	□□□□□ -0.22
ABCF3-211	ENST00000475728	TBK1	Q9UHD2	729 aa		13.69	□□□□□ -0.22
ABCF3-211	ENST00000475728	DCDC2	Q9UHG0	476 aa		13.69	□□□□□ -0.22
ABCF3-211	ENST00000475728	NAALAD2	Q9Y3Q0	740 aa		13.69	□□□□□ -0.22
ABCF3-211	ENST00000475728	SPTA1	P02549	2419 aa		13.69	□□□□□ -0.22
ABCF3-211	ENST00000475728	SGK494	L7N484	410 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	GALR3	O60755	368 aa	Predicted RBP	13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	WFS1	O76024	890 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	BMP10	O95393	424 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	SHBG	P04278	402 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	NUDT17	P0C025	328 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	ZNF888	P0CJ79	500 aa	Predicted RBP	13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	ACPP	P15309	386 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	KRT15	P19012	456 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	EPOR	P19235	508 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	PHEX	P78562	749 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	IFFO1	Q0D2I5	559 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	GTF2H2	Q13888	395 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	DEFB134	Q4QY38	66 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	VWA2	Q5GFL6	755 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	TOR1AIP1	Q5JTV8	583 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	DCAF10	Q5QP82	559 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	LIPJ	Q5W064	366 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	GRHL2	Q6ISB3	625 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	GTF2H2C	Q6P1K8	395 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	MED27	Q6P2C8	311 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	ZNF605	Q86T29	641 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	PRSS58	Q8IYP2	241 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	SRFBP1	Q8NEF9	429 aa	Known RBP	13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	OR51Q1	Q8NH59	317 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	UTP15	Q8TED0	518 aa	Known RBP	13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	AEN	Q8WTP8	325 aa	Known RBP	13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	CAVIN3	Q969G5	261 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	GAL3ST3	Q96A11	431 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	REPS1	Q96D71	796 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	PHF21B	Q96EK2	531 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	MOCOS	Q96EN8	888 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	FAR2	Q96K12	515 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	OR1F2P	Q96R84	312 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	ACTR8	Q9H981	624 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	ASB1	Q9Y576	335 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	PCDHGB7	Q9Y5F8	929 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	PCDHGA11	Q9Y5H2	935 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	HS3ST3B1	Q9Y662	390 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	CFAP46	Q8IYW2	2715 aa		13.68	□□□□□ -0.22
ABCF3-211	ENST00000475728	ATM	Q13315	3056 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	MDC1	Q14676	2089 aa	Known RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	IDS	B3KWA1	339 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	GLRA3	O75311	464 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	RDH16	O75452	317 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	PYGB	P11216	843 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	JAK1	P23458	1154 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	EEF1D	P29692	281 aa	Known RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	XCR1	P46094	333 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	SLCO1A2	P46721	670 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	CCT5	P48643	541 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	CCL11	P51671	97 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	MAT1A	Q00266	395 aa	Known RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ERCC6L	Q2NKX8	1250 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	TUBB8	Q3ZCM7	444 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	LACTB2	Q53H82	288 aa	Predicted RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	CPZ	Q66K79	652 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	TCTN3	Q6NUS6	607 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	TRIM40	Q6P9F5	258 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	SHISA6	Q6ZSJ9	500 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	PRSS41	Q7RTY9	318 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	GOLGA7	Q7Z5G4	137 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	PDSS2	Q86YH6	399 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	MYLK4	Q86YV6	388 aa	Predicted RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	LURAP1L	Q8IV03	231 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	LAS2	Q8IYD9	372 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	MZB1	Q8WU39	189 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	METTL21A	Q8WXB1	218 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ATP6V1E2	Q96A05	226 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ABHD17A	Q96GS6	310 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	CENPK	Q9BS16	269 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	SLC25A23	Q9BV35	468 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ROGDI	Q9GZN7	287 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	IPPK	Q9H8X2	491 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ATP13A2	Q9NQ11	1180 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	HCN3	Q9P1Z3	774 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	MKL2	Q9ULH7	1088 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	TSC22D4	Q9Y3Q8	395 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728		V9GYY5	206 aa	Predicted RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	ZNF462	Q96JM2	2506 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	TLN1	Q9Y490	2541 aa	Known RBP	13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	FER1L5	A0AVI2	2057 aa		13.67	□□□□□ -0.22
ABCF3-211	ENST00000475728	LRIT2	A6NDA9	550 aa		13.66	□□□□□ -0.22
ABCF3-211	ENST00000475728	SMIM23	A6NLE4	172 aa		13.66	□□□□□ -0.22
ABCF3-211	ENST00000475728	PSMD12	O00232	456 aa	Predicted RBP	13.66	□□□□□ -0.22
ABCF3-211	ENST00000475728	E2F3	O00716	465 aa		13.66	□□□□□ -0.22
ABCF3-211	ENST00000475728	ERI3	O43414	337 aa	Known RBP	13.66	□□□□□ -0.22
ABCF3-211	ENST00000475728	PRAMEF4	O60810	478 aa		13.66	□□□□□ -0.22
ABCF3-211	ENST00000475728	ALPP	P05187	535 aa		13.66	□□□□□ -0.22
ABCF3-211	ENST00000475728	CD22	P20273	847 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms