RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 ALOX12P18054 663 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 MAGEA3P43357 314 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 RGS4P49798 205 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 CCR8P51685 355 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 MLF1P58340 268 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 GPS1Q13098 491 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 ANKRD22Q5VYY1 191 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 ZNF662Q6ZS27 426 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 FGD2Q7Z6J4 655 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 ZNF740Q8NDX6 193 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 RBSNQ9H1K0 784 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 TRMT6Q9UJA5 497 aaKnown RBP16.71■□□□□ 0.27
PCGF3-209ENST00000475288 ADAMTS6Q9UKP5 1117 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 KLF13Q9Y2Y9 288 aaPredicted RBP16.71■□□□□ 0.27
PCGF3-209ENST00000475288 MED13LQ71F56 2210 aa16.71■□□□□ 0.27
PCGF3-209ENST00000475288 TRBC2A0A5B9 178 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 SAGE2PA6NJ88 616 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 CDH1P12830 882 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 CDC25BP30305 580 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 HLCSP50747 726 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 HSF1Q00613 529 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 NAE1Q13564 534 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 MEX3BQ6ZN04 569 aaKnown RBP16.7■□□□□ 0.26
PCGF3-209ENST00000475288 NCCRP1Q6ZVX7 275 aaPredicted RBP16.7■□□□□ 0.26
PCGF3-209ENST00000475288 PALM2Q8IXS6 379 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 KIF2BQ8N4N8 673 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 TBC1D19Q8N5T2 526 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 CPSF7Q8N684 471 aaKnown RBP16.7■□□□□ 0.26
PCGF3-209ENST00000475288 OR5T3Q8NGG3 340 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 C16orf52Q8NHV5 167 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 FAM57AQ8TBR7 257 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 NT5CQ8TCD5 201 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 TMEM125Q96AQ2 219 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 SDCCAG3Q96C92 435 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 SERPINB12Q96P63 405 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 FAM167BQ9BTA0 163 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 RBCK1Q9BYM8 510 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 PLSCR2Q9NRY7 297 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 C20orf96Q9NUD7 363 aaPredicted RBP16.7■□□□□ 0.26
PCGF3-209ENST00000475288 PPT2Q9UMR5 302 aa16.7■□□□□ 0.26
PCGF3-209ENST00000475288 IGKV3D-11A0A0A0MRZ8 115 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 ZNF860A6NHJ4 632 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 FCHO1O14526 889 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 NDUFS4O43181 175 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 CHST10O43529 356 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 HAUS5O94927 633 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 F7P08709 466 aaPredicted RBP16.69■□□□□ 0.26
PCGF3-209ENST00000475288 AP1S2P56377 157 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 TIAL1Q01085 375 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCGF3-209ENST00000475288 DHX9Q08211 1270 aaKnown RBP16.69■□□□□ 0.26
PCGF3-209ENST00000475288 DEFB134Q4QY38 66 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 DUPD1Q68J44 220 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 TMEM211Q6ICI0 200 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 ABHD13Q7L211 337 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 SPNS2Q8IVW8 549 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 NFAM1Q8NET5 270 aaPredicted RBP16.69■□□□□ 0.26
PCGF3-209ENST00000475288 OR56A3Q8NH54 315 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 EEF1AKMT1Q8WVE0 214 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 ASB5Q8WWX0 329 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 ATG10Q9H0Y0 220 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 TAS2R13Q9NYV9 303 aa16.69■□□□□ 0.26
PCGF3-209ENST00000475288 TCRBV16S1A1N1A0A5B0 115 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 FOXO6A8MYZ6 492 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 KLRC4-KLRK1H3BQV0 150 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 CEP104O60308 925 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 PRMT3O60678 531 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 KRT14P02533 472 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 HIST1H2AGP0C0S8 130 aaPredicted RBP16.68■□□□□ 0.26
PCGF3-209ENST00000475288 HIST1H2ADP20671 130 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 PTGER1P34995 402 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 PTGS2P35354 604 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 AHRP35869 848 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 VPS41P49754 854 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 ST13P50502 369 aaKnown RBP16.68■□□□□ 0.26
PCGF3-209ENST00000475288 ITGA8P53708 1063 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 RGS1Q08116 209 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 TERF2Q15554 542 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 TRIP13Q15645 432 aaPredicted RBP16.68■□□□□ 0.26
PCGF3-209ENST00000475288 MBOAT1Q6ZNC8 495 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 KIAA0408Q6ZU52 694 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 GAS2L3Q86XJ1 694 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 MYO1HQ8N1T3 1032 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 ZFP62Q8NB50 900 aaPredicted RBP16.68■□□□□ 0.26
PCGF3-209ENST00000475288 C2CD4AQ8NCU7 369 aaPredicted RBP16.68■□□□□ 0.26
PCGF3-209ENST00000475288 HIST1H2AHQ96KK5 128 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 SIGLEC10Q96LC7 697 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 PTCHD1Q96NR3 888 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 HIST1H2AJQ99878 128 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 H2AFJQ9BTM1 129 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 PRDM9Q9NQV7 894 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 ZFP69BQ9UJL9 534 aa16.68■□□□□ 0.26
PCGF3-209ENST00000475288 MTORP42345 2549 aa16.67■□□□□ 0.26
PCGF3-209ENST00000475288 TFECO14948 347 aaPredicted RBP16.67■□□□□ 0.26
PCGF3-209ENST00000475288 OR1F1O43749 312 aa16.67■□□□□ 0.26
PCGF3-209ENST00000475288 SCTRP47872 440 aa16.67■□□□□ 0.26
PCGF3-209ENST00000475288 PHKG1Q16816 387 aa16.67■□□□□ 0.26
PCGF3-209ENST00000475288 HSP90AA5PQ58FG0 334 aa16.67■□□□□ 0.26
PCGF3-209ENST00000475288 AGGF1Q8N302 714 aaeCLIP16.67■□□□□ 0.264e-7■■■□□ 17.8
PCGF3-209ENST00000475288 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCGF3-209ENST00000475288 TRIM58Q8NG06 486 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms