RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 TM4SF19Q96DZ7 209 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 DMRTA2Q96SC8 542 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 ENKD1Q9H0I2 346 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 ADAMTS6Q9UKP5 1117 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 MED16Q9Y2X0 877 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 DHRS7Q9Y394 339 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 ASB1Q9Y576 335 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 NCKAP5O14513 1909 aa13.13□□□□□ -0.31
CCDC78-209ENST00000474647 ADAM10O14672 748 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 B3GALT4O96024 378 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 FGGP02679 453 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 JAK1P23458 1154 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 MEOX1P50221 254 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 MPP1Q00013 466 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 NAE1Q13564 534 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 HERC3Q15034 1050 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 DEFB134Q4QY38 66 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 AGTRAPQ6RW13 159 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 CYHR1Q6ZMK1 362 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 FGD2Q7Z6J4 655 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
CCDC78-209ENST00000474647 PALM2Q8IXS6 379 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
CCDC78-209ENST00000474647 MFSD9Q8NBP5 474 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 ZNF740Q8NDX6 193 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 ELP5Q8TE02 316 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 TBC1D20Q96BZ9 403 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 OLFM1Q99784 485 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 TRMT6Q9UJA5 497 aaKnown RBP13.12□□□□□ -0.31
CCDC78-209ENST00000474647 SLC22A7Q9Y694 548 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 FREM3P0C091 2139 aa13.12□□□□□ -0.31
CCDC78-209ENST00000474647 SPG11Q96JI7 2443 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 NIPBLQ6KC79 2804 aaeCLIP13.11□□□□□ -0.31
CCDC78-209ENST00000474647 A0A1B0GTH9 108 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 NKX2-6A6NCS4 301 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 PABPN1LA6NDY0 278 aaKnown RBP13.11□□□□□ -0.31
CCDC78-209ENST00000474647 A8MUA0 341 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 GOLGA8MH3BSY2 632 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 FCHO1O14526 889 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 OR1F1O43749 312 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 HS6ST1O60243 411 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 IL10P22301 178 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 PTGS2P35354 604 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 SKP1P63208 163 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 GPS1Q13098 491 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 ANKRD22Q5VYY1 191 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 LCTLQ6UWM7 567 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 TMEM200AQ86VY9 491 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 MAIP1Q8WWC4 291 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 PTCHD1Q96NR3 888 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 NDNQ99608 321 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 FAM129AQ9BZQ8 928 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 IGSF5Q9NSI5 407 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 C20orf96Q9NUD7 363 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-209ENST00000474647 PDE10AQ9Y233 779 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 KLF13Q9Y2Y9 288 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-209ENST00000474647 COMMD10Q9Y6G5 202 aa13.11□□□□□ -0.31
CCDC78-209ENST00000474647 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
CCDC78-209ENST00000474647 SAGE2PA6NJ88 616 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 CHST10O43529 356 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 CEP104O60308 925 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 GALR3O60755 368 aaPredicted RBP13.1□□□□□ -0.31
CCDC78-209ENST00000474647 DNAJB6O75190 326 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 C8GP07360 202 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 ZNF888P0CJ79 500 aaPredicted RBP13.1□□□□□ -0.31
CCDC78-209ENST00000474647 MAOAP21397 527 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 CCND1P24385 295 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 MLF1P58340 268 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 BTG2P78543 158 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 HYAL2Q12891 473 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 LRRC8EQ6NSJ5 796 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 CAND1Q86VP6 1230 aaKnown RBP13.1□□□□□ -0.31
CCDC78-209ENST00000474647 ZNF227Q86WZ6 799 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 MYO1HQ8N1T3 1032 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 MARVELD2Q8N4S9 558 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 POGLUT1Q8NBL1 392 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 EEF1AKMT1Q8WVE0 214 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 PYCR2Q96C36 320 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 MAD1L1Q9Y6D9 718 aa13.1□□□□□ -0.31
CCDC78-209ENST00000474647 ZCWPW2A0A1B0GU75 182 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 SDR42E2A6NKP2 422 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 KLRC4-KLRK1H3BQV0 150 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 EIF3FO00303 357 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-209ENST00000474647 PRMT3O60678 531 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 PDE9AO76083 593 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 HAUS5O94927 633 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 NADKO95544 446 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-209ENST00000474647 ALOX12P18054 663 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 HNF4AP41235 474 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 RGS4P49798 205 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 HLCSP50747 726 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 CCR8P51685 355 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 ART1P52961 327 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 GPR85P60893 370 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 RGS1Q08116 209 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 SP140Q13342 867 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms