RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CTRB1P17538 263 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 CDH12P55289 794 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 RHAGQ02094 409 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 MTAPQ13126 283 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 PTGES3Q15185 160 aaKnown RBP17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 EXOC3L2Q2M3D2 409 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 CTRB2Q6GPI1 263 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 MBOAT1Q6ZNC8 495 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 SELENOMQ8WWX9 145 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 DOHHQ9BU89 302 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 CIPCQ9C0C6 399 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 MCOLN1Q9GZU1 580 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 CLEC2DQ9UHP7 191 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 STUB1Q9UNE7 303 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 CEP350Q5VT06 3117 aa17.92■□□□□ 0.46
ECHDC1-214ENST00000474289 HYKKA2RU49 373 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 PDPK1O15530 556 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 CDRT1O95170 752 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 CPSF4O95639 269 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 ITGB7P26010 798 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 PTGS2P35354 604 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 BRCC3P46736 316 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 CDC42P60953 191 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 ZXDBP98169 803 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 SPIBQ01892 262 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 ABRQ12979 859 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 MICAQ29983 383 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 PRAMEF19Q5SWL8 479 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 MSANTD1Q6ZTZ1 278 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 CLECL1Q8IZS7 167 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 GPC2Q8N158 579 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 APIPQ96GX9 242 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 MSLNLQ96KJ4 702 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 B3GALT6Q96L58 329 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 TLR8Q9NR97 1041 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 NDRG2Q9UN36 371 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 PLXNA4Q9HCM2 1894 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 A0A0D9SEW6 157 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 SCN2BO60939 215 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 CSO75390 466 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 CLDN9O95484 217 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 MAP2K3P46734 347 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 HNRNPA0Q13151 305 aaKnown RBP17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 ZBTB37Q5TC79 503 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 BBS7Q8IWZ6 715 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 FAM9CQ8IZT9 166 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 APOLD1Q96LR9 279 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 SLC29A3Q9BZD2 475 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 TRIM45Q9H8W5 580 aaPredicted RBP17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 C12orf4Q9NQ89 552 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 COQ3Q9NZJ6 369 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 CLCA3PQ9Y6N3 262 aa17.91■□□□□ 0.46
ECHDC1-214ENST00000474289 PDGFAP04085 211 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 GSTM1P09488 218 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 GJA5P36382 358 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 CRYBB1P53674 252 aaPredicted RBP17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 WNT3P56703 355 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 EFEMP1Q12805 493 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 SPHARQ15513 63 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 UPP1Q16831 310 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 LCN1P1Q5VSP4 162 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 PTCHD4Q6ZW05 846 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 ABI3BPQ7Z7G0 1075 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 ATP6V1C2Q8NEY4 427 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 OR8H1Q8NGG4 311 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 LKAAEAR1Q8TD35 194 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 GTPBP3Q969Y2 492 aaKnown RBP17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 C1QTNF7Q9BXJ2 289 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 TPT1P8Q9HAU6 139 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 POLHQ9Y253 713 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 PLD2O14939 933 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 TSC22D2O75157 780 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 OR7A10O76100 309 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 OPN1SWP03999 348 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 CLEC2LP0C7M8 214 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 OR1E2P47887 323 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 YBEYP58557 167 aaPredicted RBP17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 UGT8Q16880 541 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 METTL23Q86XA0 190 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 UPRTQ96BW1 309 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 ACAT2Q9BWD1 397 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 CLN6Q9NWW5 311 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 NDUFB11Q9NX14 153 aa17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 PLEKHB1Q9UF11 243 aaPredicted RBP17.9■□□□□ 0.46
ECHDC1-214ENST00000474289 SNTNA6NMZ2 147 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 WASHC1A8K0Z3 465 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 UPK3BL1B0FP48 263 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 UPK3BL2E5RIL1 263 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 GCM2O75603 506 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 TBX18O95935 607 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 HLA-EP13747 358 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 CTPS1P17812 591 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 EPORP19235 508 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 EVI2BP34910 448 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 ALDH9A1P49189 494 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 PTRHD1Q6GMV3 140 aaKnown RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SCN4BQ8IWT1 228 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms