RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SLC16A5O15375 505 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 AQP9O43315 295 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 SUV39H1O43463 412 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 KDM1AO60341 852 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 PRMT3O60678 531 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 KLHL18O94889 574 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 ANXA4P09525 319 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 HOXB6P17509 224 aaKnown RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 GADD45AP24522 165 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 CCR2P41597 374 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 SLC7A9P82251 487 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 SLC13A2Q13183 592 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 IER5LQ5T953 404 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 CPTPQ5TA50 214 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 FAM180BQ6P0A1 224 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 PLEKHG7Q6ZR37 379 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 NPAS3Q8IXF0 933 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 PEX5LQ8IYB4 626 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 NEIL2Q969S2 332 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 CIDECQ96AQ7 238 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 TMEM169Q96HH4 297 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 EPYCQ99645 322 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 COPS4Q9BT78 406 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 HMX1Q9NP08 348 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 GPR83Q9NYM4 423 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 PSORS1C1Q9UIG5 152 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 PADI2Q9Y2J8 665 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 MYO7AQ13402 2215 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 CLDN24A6NM45 220 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 SAP18O00422 153 aaKnown RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 DSCR3O14972 297 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 UGDHO60701 494 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF8P17098 575 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 EIF2DP41214 584 aaKnown RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 RPS13P62277 151 aaKnown RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 FOXD4Q12950 439 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 PPIGQ13427 754 aaKnown RBP eCLIP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 NLGN4XQ8N0W4 816 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 DNAJC22Q8N4W6 341 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 RASGEF1AQ8N9B8 481 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 OR9Q2Q8NGE9 314 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 RHOXF1Q8NHV9 184 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 CHTF18Q8WVB6 975 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 ASZ1Q8WWH4 475 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 S100ZQ8WXG8 99 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 GGHQ92820 318 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 POP5Q969H6 163 aaKnown RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 ZHX1-C8orf76Q96EF9 292 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 PKP4Q99569 1192 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 DOHHQ9BU89 302 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 RIOK2Q9BVS4 552 aaKnown RBP10.52□□□□□ -0.73
C9orf3-214ENST00000473778 DCSTAMPQ9H295 470 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 QPCTLQ9NXS2 382 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF226Q9NYT6 803 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 SH3BP4Q9P0V3 963 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 LRRK1Q38SD2 2015 aa10.52□□□□□ -0.73
C9orf3-214ENST00000473778 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 TGM5O43548 720 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 POP4O95707 220 aaKnown RBP10.51□□□□□ -0.73
C9orf3-214ENST00000473778 CTSLP07711 333 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 GABRB1P18505 474 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 CD40LGP29965 261 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 SELENOWP63302 87 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 FADDQ13158 208 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 HENMT1Q5T8I9 393 aaKnown RBP10.51□□□□□ -0.73
C9orf3-214ENST00000473778 GRHL2Q6ISB3 625 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 ANGPTL8Q6UXH0 198 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 LINC00299Q6ZSB3 139 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 CAMKMTQ7Z624 323 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 ADIPOR2Q86V24 386 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 SLC22A16Q86VW1 577 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 MMP21Q8N119 569 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 SVOPQ8N4V2 548 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 KIAA1958Q8N8K9 716 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 OR4C15Q8NGM1 316 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PSMA8Q8TAA3 256 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.51□□□□□ -0.73
C9orf3-214ENST00000473778 SPPL2AQ8TCT8 520 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 COQ8BQ96D53 544 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 RSPO3Q9BXY4 272 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-214ENST00000473778 ITPAQ9BY32 194 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 SPNS1Q9H2V7 528 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 FAM83DQ9H4H8 585 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 EPS8L2Q9H6S3 715 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 RUBCNLQ9H714 662 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 TRIM39Q9HCM9 518 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 CCNB1IP1Q9NPC3 277 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 FKBP14Q9NWM8 211 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 HCFC1R1Q9NWW0 138 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 BTNL2Q9UIR0 455 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 CARD8Q9Y2G2 431 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PCDHGA2Q9Y5H1 932 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PABPN1LA6NDY0 278 aaKnown RBP10.51□□□□□ -0.73
C9orf3-214ENST00000473778 NEDD8-MDP1E9PL57 170 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 DPM1O60762 260 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 TNFRSF21O75509 655 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 LEFTY1O75610 366 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 RECKO95980 971 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 PTHP01270 115 aa10.51□□□□□ -0.73
C9orf3-214ENST00000473778 URODP06132 367 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms