RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 AQP12AQ8IXF9 295 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 CCDC185Q8N715 623 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 ZNF614Q8N883 585 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 TCEANCQ8N8B7 351 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 SLCO2A1Q92959 643 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 OMA1Q96E52 524 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 ZNF486Q96H40 463 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-209ENST00000472044 CDKN2AIPNLQ96HQ2 116 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 PANX3Q96QZ0 392 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 USP28Q96RU2 1077 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 IL12RB2Q99665 862 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 CACNG6Q9BXT2 260 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 MTHFD2LQ9H903 347 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-209ENST00000472044 SCRT2Q9NQ03 307 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 ZDHHC18Q9NUE0 388 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 SPG21Q9NZD8 308 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 SATB2Q9UPW6 733 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 PPP1R3CQ9UQK1 317 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 NSG2Q9Y328 171 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 COLEC10Q9Y6Z7 277 aa3.29□□□□□ -1.88
PTCD3-209ENST00000472044 A0A087X0K7 114 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 MAGEB16A2A368 324 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 GTPBP10A4D1E9 387 aaKnown RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 SERINC4A6NH21 518 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 H0YIG0 161 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 CRCPO75575 148 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 GRAP2O75791 330 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 IGHEP01854 428 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 RNF224P0DH78 156 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 VDRP11473 427 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 TYMPP19971 482 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 OAS2P29728 719 aaKnown RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 SRD5A2P31213 254 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 OPRL1P41146 370 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 MAGEB1P43366 347 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 TSFMP43897 325 aaKnown RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 GSCP56915 257 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 HUNKP57058 714 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 FKBP1BP68106 108 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 C17orf67Q0P5P2 114 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 MTF1Q14872 753 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 SLC39A12Q504Y0 691 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 ATP1A1-AS1Q5TC04 95 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 KCTD9Q7L273 389 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 TRMT11Q7Z4G4 463 aaKnown RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 CCDC83Q8IWF9 413 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 ZC3H3Q8IXZ2 948 aaKnown RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 SLC22A15Q8IZD6 547 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 TEX26Q8N6G2 289 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 ZNF248Q8NDW4 579 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 CD99L2Q8TCZ2 262 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 BCL2L2Q92843 193 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 PDLIM5Q96HC4 596 aaKnown RBP3.28□□□□□ -1.88
PTCD3-209ENST00000472044 ART5Q96L15 291 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 NEDD4LQ96PU5 975 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 SYT15Q9BQS2 421 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 OVOL2Q9BRP0 275 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 ACPTQ9BZG2 426 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 RNPEPL1Q9HAU8 725 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 POLKQ9UBT6 870 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 ITM2BQ9Y287 266 aa3.28□□□□□ -1.88
PTCD3-209ENST00000472044 NEDD4P46934 1319 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 C2orf92A0A1B0GVN3 265 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 MPTX1A8MV57 137 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 NPIPB9F8W1W9 429 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 M0R296 226 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 SURF4O15260 269 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 MAGEC1O60732 1142 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 CLN5O75503 358 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 LETM1O95202 739 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-209ENST00000472044 ATP6V1B1P15313 513 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 SLC6A12P48065 614 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 ADARP55265 1226 aaKnown RBP3.27□□□□□ -1.89
PTCD3-209ENST00000472044 KIAA1024LP59773 190 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 DRP2Q13474 957 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 MTHFSDQ2M296 383 aaKnown RBP3.27□□□□□ -1.89
PTCD3-209ENST00000472044 MRGPRG-AS1Q2M3A8 158 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 AARDQ4LEZ3 155 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 ZC2HC1BQ5TFG8 222 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 KCTD11Q693B1 232 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 TCEAL6Q6IPX3 200 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 SLC27A4Q6P1M0 643 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 TMEM270Q6UE05 265 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 FRRS1Q6ZNA5 592 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 CATSPERDQ86XM0 798 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 RNF149Q8NC42 400 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 OR2T6Q8NHC8 308 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 NSMCE3Q96MG7 304 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 OPRPNQ99935 248 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF559Q9BR84 538 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 CCM2Q9BSQ5 444 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 SLC39A8Q9C0K1 460 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 SLC5A7Q9GZV3 580 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 WWTR1Q9GZV5 400 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 VPS33BQ9H267 617 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 CUEDC2Q9H467 287 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 FNDC4Q9H6D8 234 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-209ENST00000472044 ZDHHC6Q9H6R6 413 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 MED20Q9H944 212 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 MTRRQ9UBK8 725 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms