RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MAN2B2Q9Y2E5 1009 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 NAALAD2Q9Y3Q0 740 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 PCDHGA11Q9Y5H2 935 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 KCNMB2Q9Y691 235 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 FAM208BQ5VWN6 2430 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 MGAQ8IWI9 3026 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 LRIT2A6NDA9 550 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 FOXO6A8MYZ6 492 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 H0YIV9 168 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 SGK494L7N484 410 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 COPEO14579 308 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 DLX3O60479 287 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 ZNF888P0CJ79 500 aaPredicted RBP14.48□□□□□ -0.09
SDC3-203ENST00000471567 IL10P22301 178 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 MMP11P24347 488 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 OTX2P32243 289 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 PRKAA2P54646 552 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 HERVK_113P63132 956 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 KLC1Q07866 573 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 ADPRMQ3LIE5 342 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 DEFB134Q4QY38 66 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 VWA2Q5GFL6 755 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 TOR1AIP1Q5JTV8 583 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 VN1R5Q7Z5H4 357 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 TRABD2AQ86V40 505 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 PDSS2Q86YH6 399 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 APLFQ8IW19 511 aaPredicted RBP14.48□□□□□ -0.09
SDC3-203ENST00000471567 OR7G3Q8NG95 312 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 ZNF483Q8TF39 744 aaPredicted RBP14.48□□□□□ -0.09
SDC3-203ENST00000471567 CCT6BQ92526 530 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 ATP6V1E2Q96A05 226 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 GAL3ST3Q96A11 431 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 REPS1Q96D71 796 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 CCDC126Q96EE4 140 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 VPS50Q96JG6 964 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 MAGEB10Q96LZ2 347 aaPredicted RBP14.48□□□□□ -0.09
SDC3-203ENST00000471567 ARHGAP9Q9BRR9 750 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 ERVK-6Q9BXR3 956 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 KLHL31Q9H511 634 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 SOX17Q9H6I2 414 aaPredicted RBP14.48□□□□□ -0.09
SDC3-203ENST00000471567 NOL11Q9H8H0 719 aaKnown RBP14.48□□□□□ -0.09
SDC3-203ENST00000471567 MKS1Q9NXB0 559 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 EMCNQ9ULC0 261 aa14.48□□□□□ -0.09
SDC3-203ENST00000471567 CACNA1GO43497 2377 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CCDC151A5D8V7 595 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 PEX12O00623 359 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 OR7A17O14581 309 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 PCDH17O14917 1159 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 RDH16O75452 317 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 BMP10O95393 424 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CLDN9O95484 217 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 PROCP04070 461 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CYC1P08574 325 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 IMPDH1P20839 514 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 PIK3CBP42338 1070 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CCNG1P51959 295 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 MAT1AQ00266 395 aaKnown RBP14.47□□□□□ -0.09
SDC3-203ENST00000471567 TGM3Q08188 693 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 SYT16Q17RD7 645 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 PCSK4Q6UW60 755 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 MED25Q71SY5 747 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 PPP1R32Q7Z5V6 425 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 MRGPREQ86SM8 312 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CROCCP2Q86T23 111 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 MYLK4Q86YV6 388 aaPredicted RBP14.47□□□□□ -0.09
SDC3-203ENST00000471567 ZC3H7AQ8IWR0 971 aaKnown RBP14.47□□□□□ -0.09
SDC3-203ENST00000471567 IQCKQ8N0W5 287 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 TMEM102Q8N9M5 508 aaPredicted RBP14.47□□□□□ -0.09
SDC3-203ENST00000471567 SRFBP1Q8NEF9 429 aaKnown RBP14.47□□□□□ -0.09
SDC3-203ENST00000471567 OR2L5Q8NG80 312 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 OR51Q1Q8NH59 317 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 RDH11Q8TC12 318 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 ZNF473Q8WTR7 871 aaKnown RBP14.47□□□□□ -0.09
SDC3-203ENST00000471567 MS4A6EQ96DS6 147 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CRB3Q9BUF7 120 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 AICDAQ9GZX7 198 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 ADNPQ9H2P0 1102 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 ZBTB26Q9HCK0 441 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CCDC88CQ9P219 2028 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 ZFYVE26Q68DK2 2539 aa14.47□□□□□ -0.09
SDC3-203ENST00000471567 CHD6Q8TD26 2715 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 A0A088AWK7 358 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 PLIN3O60664 434 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 TBX6O95947 436 aaPredicted RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 OTCP00480 354 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 MYL2P10916 166 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 SFTPCP11686 197 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 PCNAP12004 261 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 ZNF10P21506 573 aaPredicted RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 HNRNPH1P31943 449 aaKnown RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 EMP2P54851 167 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 RRADP55042 308 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 POLE2P56282 527 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 FOXL2P58012 376 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 RAB8AP61006 207 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 NAA20P61599 178 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 PHEXP78562 749 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 ZNF844Q08AG5 666 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 ATP1A4Q13733 1029 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 TMEM35AQ53FP2 167 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms