RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 LMF2Q9BU23 707 aaKnown RBP4.77□□□□□ -1.65
CCDC39-202ENST00000471307 PORCNQ9H237 461 aa4.77□□□□□ -1.65
CCDC39-202ENST00000471307 KCNMB3Q9NPA1 279 aa4.77□□□□□ -1.65
CCDC39-202ENST00000471307 SDR39U1Q9NRG7 319 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-202ENST00000471307 HAUS2Q9NVX0 235 aa4.77□□□□□ -1.65
CCDC39-202ENST00000471307 PSD3Q9NYI0 1048 aa4.77□□□□□ -1.65
CCDC39-202ENST00000471307 UBIAD1Q9Y5Z9 338 aa4.77□□□□□ -1.65
CCDC39-202ENST00000471307 DDX49Q9Y6V7 483 aaKnown RBP4.77□□□□□ -1.65
CCDC39-202ENST00000471307 DOCK3Q8IZD9 2030 aa4.77□□□□□ -1.65
CCDC39-202ENST00000471307 RBBP6Q7Z6E9 1792 aaKnown RBP4.76□□□□□ -1.65
CCDC39-202ENST00000471307 E9PQ18 207 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 MSH4O15457 936 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 SLC37A4O43826 429 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 PRAMEF11O60813 436 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 CREG1O75629 220 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 LETM1O95202 739 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-202ENST00000471307 ACSL1P33121 698 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 HADHAP40939 763 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 SLC15A1P46059 708 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 UBXN2AP68543 259 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 HNRNPDQ14103 355 aaKnown RBP4.76□□□□□ -1.65
CCDC39-202ENST00000471307 GRB14Q14449 540 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 IRF3Q14653 427 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 IL17AQ16552 155 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 MEA1Q16626 185 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 RAB41Q5JT25 222 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 RESP18Q5W5W9 173 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 DHRS7BQ6IAN0 325 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-202ENST00000471307 CCDC73Q6ZRK6 1079 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 PLA2G4DQ86XP0 818 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 RAB42Q8N4Z0 105 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 LSMEM1Q8N8F7 131 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 SYAP1Q96A49 352 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-202ENST00000471307 FNBP1Q96RU3 617 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 ZNF577Q9BSK1 485 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 DCTN5Q9BTE1 182 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 FUCA2Q9BTY2 467 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 CCSER1Q9C0I3 900 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 SYNCQ9H7C4 482 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 ANKEF1Q9NU02 776 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 DDX19AQ9NUU7 478 aaKnown RBP4.76□□□□□ -1.65
CCDC39-202ENST00000471307 LRWD1Q9UFC0 647 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 GRID1Q9ULK0 1009 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 ZNF148Q9UQR1 794 aa4.76□□□□□ -1.65
CCDC39-202ENST00000471307 A0A1B0GVL5 298 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 HYKKA2RU49 373 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 MSGN1A6NI15 193 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 VILLO15195 856 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 CTAGE5O15320 804 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PAPSS1O43252 624 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-202ENST00000471307 MED24O75448 989 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PSMD10O75832 226 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 DFFBO76075 338 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 GPIP06744 558 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PGK2P07205 417 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PFKFB1P16118 471 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 MUTP22033 750 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 HOXD10P28358 340 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 SYKP43405 635 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 DSCR10P59022 87 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 C1QTNF8P60827 252 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 MAP2K1Q02750 393 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PPP2R5CQ13362 524 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PDLIM3Q53GG5 364 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-202ENST00000471307 KRT79Q5XKE5 535 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 LDB1Q86U70 411 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-202ENST00000471307 NIPA2Q8N8Q9 360 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 IQUBQ8NA54 791 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 OR4C3Q8NH37 302 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 ERMNQ8TAM6 284 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 ATP6V1E2Q96A05 226 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 CALML4Q96GE6 196 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 EPSTI1Q96J88 318 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 CLEC7AQ9BXN2 247 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 NT5C3AQ9H0P0 336 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 CUEDC2Q9H467 287 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 A4GALTQ9NPC4 353 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 SLC7A10Q9NS82 523 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 FGF21Q9NSA1 209 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 SPHK1Q9NYA1 384 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 SUCLA2Q9P2R7 463 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-202ENST00000471307 HOOK1Q9UJC3 728 aaKnown RBP4.75□□□□□ -1.65
CCDC39-202ENST00000471307 VPS28Q9UK41 221 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PLAGL1Q9UM63 463 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 KIAA1217Q5T5P2 1943 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 PLXNA1Q9UIW2 1896 aa4.75□□□□□ -1.65
CCDC39-202ENST00000471307 ASTN1O14525 1302 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 NFASCO94856 1347 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 PLXNB2O15031 1838 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 HEPACAM2A8MVW5 462 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 AP3D1O14617 1153 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 POLR2DO15514 142 aaKnown RBP4.74□□□□□ -1.65
CCDC39-202ENST00000471307 TSPAN1O60635 241 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 KINO60870 393 aaKnown RBP4.74□□□□□ -1.65
CCDC39-202ENST00000471307 TSPAN9O75954 239 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 RPA1P27694 616 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 HOXC13P31276 330 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 SFNP31947 248 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 NDUFA8P51970 172 aa4.74□□□□□ -1.65
CCDC39-202ENST00000471307 SLC8A3P57103 927 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms