RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ZNF860A6NHJ4 632 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 ANKDD1BA6NHY2 528 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 SGK494L7N484 410 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 UGDHO60701 494 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 B3GALT4O96024 378 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 ALOX12P18054 663 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 HNF4AP41235 474 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 CCT5P48643 541 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 HERVK_113P63132 956 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 TRAF3Q13114 568 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 HERC3Q15034 1050 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 TBR1Q16650 682 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 DEFB109BQ30KR1 87 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 LIPJQ5W064 366 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 ZYG11AQ6WRX3 759 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 SHISA6Q6ZSJ9 500 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 ABHD13Q7L211 337 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 MYLK4Q86YV6 388 aaPredicted RBP18.72■□□□□ 0.59
HDAC7-220ENST00000471235 IQCKQ8N0W5 287 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 SHISA5Q8N114 240 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 L3MBTL4Q8NA19 623 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 STT3BQ8TCJ2 826 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 UBE2E3Q969T4 207 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 ERVK-6Q9BXR3 956 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 SEMA4BQ9NPR2 832 aaPredicted RBP18.72■□□□□ 0.59
HDAC7-220ENST00000471235 ACSS2Q9NR19 701 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 HCN3Q9P1Z3 774 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 GRID1Q9ULK0 1009 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 POLHQ9Y253 713 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 MAP4K5Q9Y4K4 846 aa18.72■□□□□ 0.59
HDAC7-220ENST00000471235 URADA6NGE7 173 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 G3V2L1 256 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 GALR3O60755 368 aaPredicted RBP18.71■□□□□ 0.59
HDAC7-220ENST00000471235 ITGB2P05107 769 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 ZGLP1P0C6A0 271 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 SMIM10L1P0DMW3 83 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 MYL2P10916 166 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 PCNAP12004 261 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 OTX2P32243 289 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 CCNG1P51959 295 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 PRKAA2P54646 552 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 RAB8AP61006 207 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 STXBP1P61764 594 aaKnown RBP18.71■□□□□ 0.59
HDAC7-220ENST00000471235 OCA2Q04671 838 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 ADPRMQ3LIE5 342 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 CCDC153Q494R4 210 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 DEFB134Q4QY38 66 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 UNC50Q53HI1 259 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 VWA2Q5GFL6 755 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 ZNF678Q5SXM1 525 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 BEND6Q5SZJ8 279 aaPredicted RBP18.71■□□□□ 0.59
HDAC7-220ENST00000471235 RAB43Q86YS6 212 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 SLC22A9Q8IVM8 553 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 ZC3H7AQ8IWR0 971 aaKnown RBP18.71■□□□□ 0.59
HDAC7-220ENST00000471235 PRSS58Q8IYP2 241 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 BANPQ8N9N5 519 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 OR7G3Q8NG95 312 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 ZNF473Q8WTR7 871 aaKnown RBP18.71■□□□□ 0.59
HDAC7-220ENST00000471235 EXTL1Q92935 676 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 GAL3ST3Q96A11 431 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 MIEF2Q96C03 454 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 MS4A6EQ96DS6 147 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 SMIM10Q96HG1 83 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 CDK15Q96Q40 435 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 YIPF2Q9BWQ6 316 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 MKKSQ9NPJ1 570 aaPredicted RBP18.71■□□□□ 0.59
HDAC7-220ENST00000471235 C14orf105Q9NVL8 296 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 RNF11Q9Y3C5 154 aa18.71■□□□□ 0.59
HDAC7-220ENST00000471235 TNRC6AQ8NDV7 1962 aaKnown RBP18.71■□□□□ 0.59
HDAC7-220ENST00000471235 FAM208BQ5VWN6 2430 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 LRIT2A6NDA9 550 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 TSPAN8P19075 237 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 ARL1P40616 181 aaPredicted RBP18.7■□□□□ 0.58
HDAC7-220ENST00000471235 CDH13P55290 713 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 KLC1Q07866 573 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 RBBP7Q16576 425 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 BORAQ6PGQ7 559 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 PPP1R32Q7Z5V6 425 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 MRGPREQ86SM8 312 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 OR5T3Q8NGG3 340 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 RDH11Q8TC12 318 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 THAP4Q8WY91 577 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 ATP6V1E2Q96A05 226 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 L3HYPDHQ96EM0 354 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 NTMT1Q9BV86 223 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 MS4A8Q9BY19 250 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 MAN2B2Q9Y2E5 1009 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 ATMQ13315 3056 aa18.7■□□□□ 0.58
HDAC7-220ENST00000471235 ZFYVE26Q68DK2 2539 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 A0A1B0GTL3 188 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 H0YIV9 168 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 ERVH48-1M5A8F1 160 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 ERI3O43414 337 aaKnown RBP18.69■□□□□ 0.58
HDAC7-220ENST00000471235 SUPT7LO94864 414 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 CLDN9O95484 217 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 IMPDH1P20839 514 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 SERPINB1P30740 379 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 SKP1P63208 163 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 OLR1P78380 273 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 ATP1A4Q13733 1029 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms