RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PPM1MQ96MI6 270 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 OR2A5Q96R48 311 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 TBCDQ9BTW9 1192 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 SLC25A23Q9BV35 468 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 CCDC106Q9BWC9 280 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 EBPLQ9BY08 206 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 BRINP2Q9C0B6 783 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 SDR39U1Q9NRG7 319 aaPredicted RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 CCDC167Q9P0B6 97 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 AKAP7Q9P0M2 348 aaPredicted RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 MCM8Q9UJA3 840 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 ADAM29Q9UKF5 820 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 BTBD3Q9Y2F9 522 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 WBP11Q9Y2W2 641 aaKnown RBP9.32□□□□□ -0.92
CCM2-204ENST00000470837 GPR45Q9Y5Y3 372 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 SPACA6W5XKT8 324 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 MUC3AQ02505 3323 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 KMT2EQ8IZD2 1858 aa9.32□□□□□ -0.92
CCM2-204ENST00000470837 MN1Q10571 1320 aaPredicted RBP9.31□□□□□ -0.92
CCM2-204ENST00000470837 IGHV5-51A0A0C4DH38 117 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 LY6G6EA0A0G2JKS1 128 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 LOC100653049A0A140TA62 436 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 C4orf47A7E2U8 309 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 NR5A2O00482 541 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 DLL1O00548 723 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 KIF1CO43896 1103 aaKnown RBP9.31□□□□□ -0.92
CCM2-204ENST00000470837 SH3BP5O60239 455 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 PRMT3O60678 531 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 KRT34O76011 436 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 ETHE1O95571 254 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 C9P02748 559 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 STATHP02808 62 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 SNRPB2P08579 225 aaKnown RBP9.31□□□□□ -0.92
CCM2-204ENST00000470837 JAK1P23458 1154 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 ACP1P24666 158 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 TBL3Q12788 808 aaKnown RBP9.31□□□□□ -0.92
CCM2-204ENST00000470837 ART3Q13508 389 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 SLC9A5Q14940 896 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 HERC3Q15034 1050 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 ZIC1Q15915 447 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 PHF19Q5T6S3 580 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 FOXR1Q6PIV2 292 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 PAOXQ6QHF9 649 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 C6orf89Q6UWU4 347 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 DBX2Q6ZNG2 339 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 VN1R5Q7Z5H4 357 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 R3HCC1LQ7Z5L2 792 aaKnown RBP9.31□□□□□ -0.92
CCM2-204ENST00000470837 YTHDF3Q7Z739 585 aaKnown RBP9.31□□□□□ -0.92
CCM2-204ENST00000470837 TMEM132CQ8N3T6 1108 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 PCYOX1LQ8NBM8 494 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 CREB3L4Q8TEY5 395 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 FCRL4Q96PJ5 515 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 TSSK3Q96PN8 268 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 C17orf62Q9BQA9 187 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 NUDT22Q9BRQ3 303 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 FAIM2Q9BWQ8 316 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 SLC7A5P2Q9GIP4 190 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 CHRNA10Q9GZZ6 450 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 ATAD3AQ9NVI7 634 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 NDE1Q9NXR1 346 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 SERTAD3Q9UJW9 196 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 PILRAQ9UKJ1 303 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 ATXN7L1Q9ULK2 861 aaPredicted RBP9.31□□□□□ -0.92
CCM2-204ENST00000470837 U3KQA8 63 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 ANKRD12Q6UB98 2062 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 CACNA1EQ15878 2313 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 FANCMQ8IYD8 2048 aa9.31□□□□□ -0.92
CCM2-204ENST00000470837 LOC105369274A0A096LPK9 316 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 LOC102723532A0A0G2JNH3 316 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 FAM234BA2RU67 622 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CCDC154A6NI56 674 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 BBIP1A8MTZ0 92 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CAPN14A8MX76 684 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 PLPP1O14494 284 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CDX4O14627 284 aaPredicted RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 CFLARO15519 480 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 B3GALT2O43825 422 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 NRP2O60462 931 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 UNC5CO95185 931 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CBX6O95503 412 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 IL6P05231 212 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 ZNF888P0CJ79 500 aaPredicted RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 COX4I1P13073 169 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 COX7A2P14406 83 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 HOXB3P14651 431 aaPredicted RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 SDC1P18827 310 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 GPX3P22352 226 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 TLX1P31314 330 aaPredicted RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 HNRNPH1P31943 449 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 CSF2RBP32927 897 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CSTF2P33240 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCM2-204ENST00000470837 MRPL19P49406 292 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 POLR2JP52435 117 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 MTTPP55157 894 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 CLDN8P56748 225 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 RAB8AP61006 207 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 UFM1P61960 85 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 TRA2BP62995 288 aaKnown RBP9.3□□□□□ -0.92
CCM2-204ENST00000470837 BTN3A2P78410 334 aa9.3□□□□□ -0.92
CCM2-204ENST00000470837 E2F1Q01094 437 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms