RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GALPQ9UBC7 116 aa17.72■□□□□ 0.43
NCKIPSD-209ENST00000470006 FBXW2Q9UKT8 454 aa17.72■□□□□ 0.43
NCKIPSD-209ENST00000470006 ERVK-11Q9UQG0 969 aa17.72■□□□□ 0.43
NCKIPSD-209ENST00000470006 FIGNL2A6NMB9 653 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 SLC16A5O15375 505 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 APRTP07741 180 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 UQCRC1P31930 480 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 OLR1P78380 273 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 GBX1Q14549 363 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 TMEM198Q66K66 360 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 MRNIPQ6NTE8 343 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 MDGA2Q7Z553 956 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 REXO1L1PQ8IX06 675 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 WFDC11Q8NEX6 87 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 CREB3L4Q8TEY5 395 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 TTYH2Q9BSA4 534 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 RAB6BQ9NRW1 208 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 ALKBH4Q9NXW9 302 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 CRIM1Q9NZV1 1036 aa17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 HRNRQ86YZ3 2850 aaPredicted RBP17.71■□□□□ 0.43
NCKIPSD-209ENST00000470006 A0A0G2JNJ9 132 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 TRBV11-1A0A0K0K1C0 115 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 SAGE2PA6NJ88 616 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 GOLGA8KD6RF30 607 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 GOLGA8TH3BQL2 631 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 ACOT7O00154 380 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 ESR1P03372 595 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 TUBB4AP04350 444 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 SLC35G6P0C7Q6 338 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 GLI4P10075 376 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 NMBRP28336 390 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 GRK3P35626 688 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 COILP38432 576 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 HYAL2Q12891 473 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 KEAP1Q14145 624 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 HERC3Q15034 1050 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 RNF187Q5TA31 235 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 CAPN13Q6MZZ7 669 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 SLC35B2Q8TB61 432 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 NUDT8Q8WV74 236 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 LPGAT1Q92604 370 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 ALKBH8Q96BT7 664 aaKnown RBP17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 SMC6Q96SB8 1091 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 CCDC177Q9NQR7 707 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 KCMF1Q9P0J7 381 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 Q9UFV3 132 aa17.7■□□□□ 0.42
NCKIPSD-209ENST00000470006 BCKDKO14874 412 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 CHST10O43529 356 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 ZBTB14O43829 449 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 ITGA10O75578 1167 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 VAPBO95292 243 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 SERPIND1P05546 499 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 INHBBP09529 407 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 STIP1P31948 543 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 SKP1P63208 163 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 MEF2AQ02078 507 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 SLC25A35Q3KQZ1 300 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 TTLL9Q3SXZ7 439 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 LIX1LQ8IVB5 337 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 FBXO15Q8NCQ5 510 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 LRRN4CLQ8ND94 238 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 MBD6Q96DN6 1003 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 TM4SF19Q96DZ7 209 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 MDFIQ99750 246 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 ATG10Q9H0Y0 220 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 ACAD8Q9UKU7 415 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 SLC22A7Q9Y694 548 aa17.69■□□□□ 0.42
NCKIPSD-209ENST00000470006 A6NNC1 897 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 LCMT2O60294 686 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 RAF1P04049 648 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 CLCN2P51788 898 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 BTG2P78543 158 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 CUL1Q13616 776 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 DEFB113Q30KQ7 82 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 DEFB134Q4QY38 66 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 PAMR1Q6UXH9 720 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 LRRC56Q8IYG6 542 aaPredicted RBP17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 UBL4BQ8N7F7 174 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 ARMC2Q8NEN0 867 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 ATG4AQ8WYN0 398 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 CALR3Q96L12 384 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 DMRT3Q9NQL9 472 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 TREX1Q9NSU2 369 aa17.68■□□□□ 0.42
NCKIPSD-209ENST00000470006 RTTNQ86VV8 2226 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 TCRBV7S2A1N4TA0A589 114 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 DNAJB6O75190 326 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 ETS1P14921 441 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 MAOAP21397 527 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 IMPA1P29218 277 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 SSR4P51571 173 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 CES3Q6UWW8 571 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 PRUNE1Q86TP1 453 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 SLC22A16Q86VW1 577 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 C17orf64Q86WR6 236 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 PSD4Q8NDX1 1056 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 FAM129AQ9BZQ8 928 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 PCBD2Q9H0N5 130 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 RHBGQ9H310 441 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 LDAHQ9H6V9 325 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms