RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TMPRSS11BQ86T26 416 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 BBOF1Q8ND07 529 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 M1APQ8TC57 530 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 TBC1D20Q96BZ9 403 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 MAGEB10Q96LZ2 347 aaPredicted RBP15.34■□□□□ 0.05
COL9A3-208ENST00000469802 NPAS2Q99743 824 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 AIF1LQ9BQI0 150 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 AICDAQ9GZX7 198 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL9A3-208ENST00000469802 MMP25Q9NPA2 562 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 OSGIN2Q9Y236 505 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 SLC22A14Q9Y267 594 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 DYRK1BQ9Y463 629 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 KCNE2Q9Y6J6 123 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 CELSR2Q9HCU4 2923 aa15.33■□□□□ 0.05
COL9A3-208ENST00000469802 CHST10O43529 356 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 PRAMEF2O60811 474 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 PIAS1O75925 651 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 C1QAP02745 245 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 UQCRHP07919 91 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 SMIM10L1P0DMW3 83 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 OLR1P78380 273 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 USP10Q14694 798 aaKnown RBP15.33■□□□□ 0.04
COL9A3-208ENST00000469802 TSNQ15631 228 aaKnown RBP15.33■□□□□ 0.04
COL9A3-208ENST00000469802 NSDHLQ15738 373 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 ACER2Q5QJU3 275 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 BEST3Q8N1M1 668 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 CREB3L4Q8TEY5 395 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 RHBDF1Q96CC6 855 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 SMIM10Q96HG1 83 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 LPAR4Q99677 370 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 ERP44Q9BS26 406 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 DERL2Q9GZP9 239 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 CLK4Q9HAZ1 481 aaKnown RBP15.33■□□□□ 0.04
COL9A3-208ENST00000469802 STMN3Q9NZ72 180 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 GRHL1Q9NZI5 618 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 WHRNQ9P202 907 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 ABI3Q9P2A4 366 aa15.33■□□□□ 0.04
COL9A3-208ENST00000469802 CACNA1DQ01668 2161 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 IGKV3D-11A0A0A0MRZ8 115 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 FAM187AA6NFU0 413 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 EIF3HO15372 352 aaKnown RBP eCLIP15.32■□□□□ 0.043e-9■□□□□ 10.6
COL9A3-208ENST00000469802 LRRTM2O43300 516 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 SERPIND1P05546 499 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 JAK1P23458 1154 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 SSTR1P30872 391 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 SLC26A5P58743 744 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 MRPS25P82663 173 aaKnown RBP15.32■□□□□ 0.04
COL9A3-208ENST00000469802 POU4F1Q01851 419 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 FCRLBQ6BAA4 426 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 QSOX2Q6ZRP7 698 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 CRLF3Q8IUI8 442 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 MDS2Q8NDY4 140 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 TRPV3Q8NET8 790 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 SPATA4Q8NEY3 305 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 ZNF354BQ96LW1 612 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 EGFL8Q99944 293 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 KCNK13Q9HB14 408 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 GPAMQ9HCL2 828 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 COPG2Q9UBF2 871 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 CTNNAL1Q9UBT7 734 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 PCDHGB6Q9Y5F9 930 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 NOTCH2Q04721 2471 aa15.32■□□□□ 0.04
COL9A3-208ENST00000469802 MYO7BQ6PIF6 2116 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 TCRBV9S1A1TA0A576 114 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 A8MUI8 341 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 CXorf49A8MYA2 514 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-208ENST00000469802 RAD51CO43502 376 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 MAN1A2O60476 641 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 RASAL1O95294 804 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 SERPINA6P08185 405 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 MST1P26927 711 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 PER3P56645 1201 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 CALCOCO2Q13137 446 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 TUBA3CQ13748 450 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 TGFBIQ15582 683 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 ZKSCAN8Q15776 578 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-208ENST00000469802 C18orf21Q32NC0 220 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-208ENST00000469802 TUBA3EQ6PEY2 450 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 SLCO4C1Q6ZQN7 724 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 CAPN12Q6ZSI9 719 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 FRA10AC1Q70Z53 315 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 CYS1Q717R9 158 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.31■□□□□ 0.04
COL9A3-208ENST00000469802 LGI4Q8N135 537 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 DNAJB8Q8NHS0 232 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 ELP5Q8TE02 316 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 PYROXD1Q8WU10 500 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 GPR22Q99680 433 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 RBBP8Q99708 897 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 TMEM79Q9BSE2 394 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 PHACTR1Q9C0D0 580 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 DPH5Q9H2P9 285 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 KLHL31Q9H511 634 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 SAYSD1Q9NPB0 183 aa15.31■□□□□ 0.04
COL9A3-208ENST00000469802 MTO1Q9Y2Z2 717 aaKnown RBP15.31■□□□□ 0.04
COL9A3-208ENST00000469802 TCRBV16S1A1N1A0A5B0 115 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 URADA6NGE7 173 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 FAM159BA6NKW6 160 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 WDR47O94967 919 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms