RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PABPN1LA6NDY0 278 aaKnown RBP13.77□□□□□ -0.21
COL27A1-203ENST00000468565 FCHO1O14526 889 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 TXNDC9O14530 226 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 MED26O95402 600 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 PROCP04070 461 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 UMODP07911 640 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 CALB2P22676 271 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 GRK2P25098 689 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 MAGEA12P43365 314 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 KLRB1Q12918 225 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 GARNL3Q5VVW2 1013 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 CSNK1A1LQ8N752 337 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 RERGQ96A58 199 aaPredicted RBP13.77□□□□□ -0.21
COL27A1-203ENST00000468565 MVB12AQ96EY5 273 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 C10orf90Q96M02 699 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 SPSB2Q99619 263 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 SLC25A23Q9BV35 468 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 SGPP1Q9BX95 441 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 POPDC3Q9HBV1 291 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 ZNF304Q9HCX3 659 aa13.77□□□□□ -0.21
COL27A1-203ENST00000468565 CUEDC1Q9NWM3 386 aaPredicted RBP13.77□□□□□ -0.21
COL27A1-203ENST00000468565 K7EM74 188 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 HAT1O14929 419 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 SERPINE1P05121 402 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 OR1D4P47884 311 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 CCL11P51671 97 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PGGT1BP53609 377 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 NKG7Q16617 165 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 LCTLQ6UWM7 567 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 MBOAT1Q6ZNC8 495 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ASB18Q6ZVZ8 466 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ADCK2Q7Z695 626 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 WDR75Q8IWA0 830 aaKnown RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 NKAPQ8N5F7 415 aaKnown RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PPP4R1Q8TF05 950 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 UTP4Q969X6 686 aaKnown RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PTCD3Q96EY7 689 aaKnown RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 FER1L6-AS2Q96M78 137 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ARL8BQ9NVJ2 186 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ARL15Q9NXU5 204 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 RUVBL1Q9Y265 456 aaKnown RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 KCNE1BA0A087WTH5 132 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 VSTM2BA6NLU5 285 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 A8MUI8 341 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 H7BY64 318 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PEX12O00623 359 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ESRRAP11474 423 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 CASRP41180 1078 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 NAE1Q13564 534 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 CES4AQ5XG92 561 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 CAPN13Q6MZZ7 669 aaPredicted RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 TMEM207Q6UWW9 146 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PPP1R32Q7Z5V6 425 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 AGAP11Q8TF27 550 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 SREK1Q8WXA9 508 aaKnown RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ATL1Q8WXF7 558 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 FBXL8Q96CD0 374 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 VPS39Q96JC1 886 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PRAP1Q96NZ9 151 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 BTBD10Q9BSF8 475 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 HAUS8Q9BT25 410 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 ATG10Q9H0Y0 220 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 G3BP2Q9UN86 482 aaKnown RBP13.76□□□□□ -0.21
COL27A1-203ENST00000468565 CDC14AQ9UNH5 594 aa13.76□□□□□ -0.21
COL27A1-203ENST00000468565 PDGFAP04085 211 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 MMP11P24347 488 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 SLC1A6P48664 564 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 PGDP52209 483 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 AQP5P55064 265 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 TAS2R39P59534 338 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 RPS15AP62244 130 aaKnown RBP13.75□□□□□ -0.21
COL27A1-203ENST00000468565 PCLAFQ15004 111 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 TBCCQ15814 346 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 HKDC1Q2TB90 917 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 WLSQ5T9L3 541 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 SBSNQ6UWP8 590 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 ZCCHC23Q6ZST2 131 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 C17orf64Q86WR6 236 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 ARHGEF39Q8N4T4 335 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 METTL27Q8N6F8 245 aaPredicted RBP13.75□□□□□ -0.21
COL27A1-203ENST00000468565 OR56A3Q8NH54 315 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 COL26A1Q96A83 441 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 THAP11Q96EK4 314 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 P4HTMQ9NXG6 502 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 TMEM216Q9P0N5 145 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 COPG2Q9UBF2 871 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 MID2Q9UJV3 735 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 MAU2Q9Y6X3 613 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 SCN3AQ9NY46 2000 aa13.75□□□□□ -0.21
COL27A1-203ENST00000468565 IGLV3-12A0A075B6K2 115 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 KITP10721 976 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 CPA3P15088 417 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 SAT1P21673 171 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 CSNK1G2P78368 415 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 POU4F1Q01851 419 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 PPP1R3AQ16821 1122 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 DCAF10Q5QP82 559 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms