RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PAFAH2Q99487 392 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 AIF1LQ9BQI0 150 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 VPS11Q9H270 941 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 CNOT10Q9H9A5 744 aaKnown RBP13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 PELI2Q9HAT8 420 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 IGSF5Q9NSI5 407 aa13.32□□□□□ -0.28
CCHCR1-211ENST00000467553 A0A096LPK6 155 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 MASP2O00187 686 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 CLGNO14967 610 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 CCNT2O60583 730 aaKnown RBP13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 STK16O75716 305 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 LDLRP01130 860 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 SLC35G6P0C7Q6 338 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 C1GALT1C1LP0DN25 315 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 IL1RNP18510 177 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 GNAZP19086 355 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 SLC26A3P40879 764 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 SLC6A12P48065 614 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 SERPINB8P50452 374 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 SERPINB9P50453 376 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 MAT1AQ00266 395 aaKnown RBP13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 KLC1Q07866 573 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 TLR1Q15399 786 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 CDKL4Q5MAI5 379 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 TMEM214Q6NUQ4 689 aaKnown RBP13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 PRSS41Q7RTY9 318 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 LAPTM4BQ86VI4 370 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 SNX31Q8N9S9 440 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 OR11G2Q8NGC1 345 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 DNAJB14Q8TBM8 379 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 MOCOSQ96EN8 888 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 TMEM79Q9BSE2 394 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 CRB3Q9BUF7 120 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 CAPS2Q9BXY5 557 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 DNAJC11Q9NVH1 559 aa13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 PTBP2Q9UKA9 531 aaKnown RBP13.31□□□□□ -0.28
CCHCR1-211ENST00000467553 EXOC1LA0A1B0GW35 172 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 A0A1W2PQ72 361 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 SGK494L7N484 410 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 UBXN8O00124 270 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 MAP2K7O14733 419 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 NDUFS4O43181 175 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 KRT38O76015 456 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ALDOAP04075 364 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 EDN3P14138 238 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ACPPP15309 386 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 GGT5P36269 586 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 HNF4AP41235 474 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 SCTRP47872 440 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 EMP2P54851 167 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 PER3P56645 1201 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 REEP5Q00765 189 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 CDC16Q13042 620 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 DSG2Q14126 1118 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ZNF169Q14929 603 aaPredicted RBP13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ATG9BQ674R7 924 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ISLR2Q6UXK2 745 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 SLCO4C1Q6ZQN7 724 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 TRMT10CQ7L0Y3 403 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 TAOK1Q7L7X3 1001 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 CCDC91Q7Z6B0 441 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 GSPT2Q8IYD1 628 aaKnown RBP13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 KLHDC8AQ8IYD2 350 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 CENPLQ8N0S6 344 aaPredicted RBP13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 AMER3Q8N944 861 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ANKRD53Q8N9V6 530 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 PDPRQ8NCN5 879 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ATOH8Q96SQ7 321 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 SARGQ9BW04 601 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 CD244Q9BZW8 370 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ANKHQ9HCJ1 492 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 MKKSQ9NPJ1 570 aaPredicted RBP13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 C14orf105Q9NVL8 296 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 NUDT4Q9NZJ9 180 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ZFP69BQ9UJL9 534 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ERRFI1Q9UJM3 462 aaPredicted RBP13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 C3orf18Q9UK00 162 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 SCN2AQ99250 2005 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 ITPR2Q14571 2701 aa13.3□□□□□ -0.28
CCHCR1-211ENST00000467553 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 H0YIG0 161 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 RIPK2O43353 540 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 KERAO60938 352 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 KLHL2O95198 593 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 NSA2O95478 260 aaKnown RBP13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 HEXBP07686 556 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 CYC1P08574 325 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 ICAM2P13598 275 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 CXCR2P25025 360 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 AHRP35869 848 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 AGTR2P50052 363 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 RGS1Q08116 209 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 MFAP5Q13361 173 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 PWP1Q13610 501 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 ACAP2Q15057 778 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 INAQ16352 499 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 XKR6Q5GH73 641 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
CCHCR1-211ENST00000467553 KLC3Q6P597 504 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms