RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	GRIA3	P42263	894 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	PTDSS1	P48651	473 aa	Known RBP	11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	MAPK12	P53778	367 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	WNT3	P56703	355 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	TAS2R50	P59544	299 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	HHEX	Q03014	270 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	C2orf80	Q0P641	193 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	PDE7A	Q13946	482 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	ZIC1	Q15915	447 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	DUOXA1	Q1HG43	343 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	RUNDC3A	Q59EK9	446 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	TOR1AIP1	Q5JTV8	583 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	WDR45B	Q5MNZ6	344 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	CCNYL2	Q5T2Q4	361 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	FAM71E1	Q6IPT2	247 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	LCN8	Q6JVE9	175 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	ZFP1	Q6P2D0	407 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	TSSK4	Q6SA08	328 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	CYP2R1	Q6VVX0	501 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	LRRC74B	Q6ZQY2	392 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	TMEM26	Q6ZUK4	368 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	RBM12B	Q8IXT5	1001 aa	Known RBP	11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	CLECL1	Q8IZS7	167 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	C1orf216	Q8TAB5	229 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.75	□□□□□ -0.53	5e-6	■■■■■ 56.5
HDLBP-231	ENST00000467435	LMX1A	Q8TE12	382 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	RGMA	Q96B86	450 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	PPCDC	Q96CD2	204 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	GBP5	Q96PP8	586 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	SH3GL1	Q99961	368 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	TACO1	Q9BSH4	297 aa	Known RBP	11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	SARG	Q9BW04	601 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	SLC6A13	Q9NSD5	602 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	ANKMY1	Q9P2S6	941 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	SPAST	Q9UBP0	616 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	EGFL7	Q9UHF1	273 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	ADAM29	Q9UKF5	820 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	DOLK	Q9UPQ8	538 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	EXO1	Q9UQ84	846 aa	Known RBP	11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	BTBD3	Q9Y2F9	522 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	AP3M1	Q9Y2T2	418 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	SNX13	Q9Y5W8	968 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	AP1M2	Q9Y6Q5	423 aa		11.75	□□□□□ -0.53
HDLBP-231	ENST00000467435	GABRR3	A8MPY1	467 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ARPC2	O15144	300 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	SCN2B	O60939	215 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	MAG	P20916	626 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	HTR1E	P28566	365 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	PTPN6	P29350	595 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	SSR2	P43308	183 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	TRPC1	P48995	793 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	MAZ	P56270	477 aa	Known RBP	11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	C21orf59	P57076	290 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	RPS15A	P62244	130 aa	Known RBP	11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	SIGLEC14	Q08ET2	396 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	MUM1	Q2TAK8	710 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	TMEM35A	Q53FP2	167 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ZNF385B	Q569K4	471 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	TJAP1	Q5JTD0	557 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ANXA8L1	Q5VT79	327 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	SPESP1	Q6UW49	350 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	MAMSTR	Q6ZN01	415 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	OOSP2	Q86WS3	158 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ZNF761	Q86XN6	746 aa	Predicted RBP	11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	PTRH1	Q86Y79	214 aa	Known RBP	11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	AVL9	Q8NBF6	648 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	TRPV3	Q8NET8	790 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	DNASE2B	Q8WZ79	361 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ZUFSP	Q96AP4	578 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	MIEF2	Q96C03	454 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	COQ8B	Q96D53	544 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	MTERF3	Q96E29	417 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	CCDC115	Q96NT0	180 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	PANX1	Q96RD7	426 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ECSIT	Q9BQ95	431 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	THUMPD3	Q9BV44	507 aa	Known RBP	11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	AICDA	Q9GZX7	198 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	IKZF5	Q9H5V7	419 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	LHX9	Q9NQ69	397 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	PRMT8	Q9NR22	394 aa	Predicted RBP	11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ATAD3A	Q9NVI7	634 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	SH3BP4	Q9P0V3	963 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ACTR3B	Q9P1U1	418 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	BTNL2	Q9UIR0	455 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	USP22	Q9UPT9	525 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	PCDHB14	Q9Y5E9	798 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	PCDHGA2	Q9Y5H1	932 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	ENTPD2	Q9Y5L3	495 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	PRUNE2	Q8WUY3	3088 aa		11.74	□□□□□ -0.53
HDLBP-231	ENST00000467435	CCDC163	A0A0D9SF12	145 aa		11.73	□□□□□ -0.53
HDLBP-231	ENST00000467435		A0A0G2JN53	185 aa		11.73	□□□□□ -0.53
HDLBP-231	ENST00000467435	TCRBV3S1	A0A5B6	114 aa		11.73	□□□□□ -0.53
HDLBP-231	ENST00000467435	OR2A25	A4D2G3	310 aa		11.73	□□□□□ -0.53
HDLBP-231	ENST00000467435	LRIT2	A6NDA9	550 aa		11.73	□□□□□ -0.53
HDLBP-231	ENST00000467435	OR5K3	A6NET4	321 aa		11.73	□□□□□ -0.53
HDLBP-231	ENST00000467435	AQP12B	A6NM10	295 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms