RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SULT1C3Q6IMI6 304 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 KLC3Q6P597 504 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 PPP1R32Q7Z5V6 425 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 ZNF605Q86T29 641 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 CENPLQ8N0S6 344 aaPredicted RBP9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 PLD6Q8N2A8 252 aaKnown RBP9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 TCAIMQ8N3R3 496 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 AMER3Q8N944 861 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 PDPRQ8NCN5 879 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 ABHD11Q8NFV4 315 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 DCAKDQ8WVC6 231 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 C8orf44Q96CB5 159 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 TLCD1Q96CP7 247 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 UBXN10Q96LJ8 280 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 ATOH8Q96SQ7 321 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 ADNPQ9H2P0 1102 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 PELI2Q9HAT8 420 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 ANKHQ9HCJ1 492 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 DNAJC11Q9NVH1 559 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 P4HTMQ9NXG6 502 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 NUDT4Q9NZJ9 180 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 ACTL7BQ9Y614 415 aa9.24□□□□□ -0.93
RTFDC1-205ENST00000466260 LRRC14BA6NHZ5 514 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 SMIM23A6NLE4 172 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 H2AFYO75367 372 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 SH3BGRLO75368 114 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 CDC123O75794 336 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 KRT38O76015 456 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 RECKO95980 971 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ALBP02768 609 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 HEXBP07686 556 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ABHD2P08910 425 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ZNF888P0CJ79 500 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 C1GALT1C1LP0DN25 315 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 SFTPCP11686 197 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 GNAZP19086 355 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ITGA3P26006 1051 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ARL1P40616 181 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 SCTRP47872 440 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 SERPINB9P50453 376 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 RRADP55042 308 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 RAB8AP61006 207 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 RGS1Q08116 209 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 SLC29A2Q14542 456 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 PDK4Q16654 411 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 PFKFB4Q16877 469 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 FAM83EQ2M2I3 478 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 DEFB134Q4QY38 66 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 XKR6Q5GH73 641 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ADNP2Q6IQ32 1131 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 TMEM214Q6NUQ4 689 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ISCA2Q86U28 154 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 MYLK4Q86YV6 388 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 APLFQ8IW19 511 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ZC3H7AQ8IWR0 971 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 TMEM102Q8N9M5 508 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ANKRD53Q8N9V6 530 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 CLEC1AQ8NC01 280 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 FDCSPQ8NFU4 85 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 OR5T3Q8NGG3 340 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 TM4SF19Q96DZ7 209 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 THAP11Q96EK4 314 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 MVB12AQ96EY5 273 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 PEX11GQ96HA9 241 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 FER1L6-AS2Q96M78 137 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 NUDT9Q9BW91 350 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 CCDC134Q9H6E4 229 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 WDR54Q9H977 334 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 SENP1Q9P0U3 644 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 OPTCQ9UBM4 332 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 TBK1Q9UHD2 729 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 C3orf18Q9UK00 162 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 FBXL4Q9UKA2 621 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 NXT1Q9UKK6 140 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 G3BP2Q9UN86 482 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 NAALAD2Q9Y3Q0 740 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 MAP4K5Q9Y4K4 846 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ANGPTL3Q9Y5C1 460 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 HS3ST3B1Q9Y662 390 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 IGSF10Q6WRI0 2623 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 CHD6Q8TD26 2715 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 ATRXP46100 2492 aa9.23□□□□□ -0.93
RTFDC1-205ENST00000466260 KCNE1BA0A087WTH5 132 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 OR2W5A6NFC9 320 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 IDSB3KWA1 339 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 B8ZZF3 427 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 GOLGA8RI6L899 631 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 SOCS6O14544 535 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 IPO13O94829 963 aaKnown RBP9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 KLHL18O94889 574 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 KLHL2O95198 593 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 NSA2O95478 260 aaKnown RBP9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 PCNAP12004 261 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 MMP11P24347 488 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 SLC26A3P40879 764 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 XCR1P46094 333 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 PGDP52209 483 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 EMP2P54851 167 aa9.22□□□□□ -0.93
RTFDC1-205ENST00000466260 IRF8Q02556 426 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms