RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 COMMD6Q7Z4G1 85 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 FAM124AQ86V42 546 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 OR5AK3PQ8NH89 298 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 APH1BQ8WW43 257 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 REPS1Q96D71 796 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 FEVQ99581 238 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 REEP4Q9H6H4 257 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 GPATCH2Q9NW75 528 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 NDUFAF4Q9P032 175 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 SPASTQ9UBP0 616 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 MAPRE3Q9UPY8 281 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 PADI2Q9Y2J8 665 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 DYRK1BQ9Y463 629 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 TSPAN11A1L157 253 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 RHOP08100 348 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 CLTBP09497 229 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 HLA-EP13747 358 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 NPPBP16860 134 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 PRIM2P49643 509 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 ERVFC1P60507 584 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 NTHL1P78549 312 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 PARS2Q7L3T8 475 aaKnown RBP16.27■□□□□ 0.19
ACTB-207ENST00000462494 SNX29P2Q8IUI4 249 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 GPR65Q8IYL9 337 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 ZNF557Q8N988 423 aaPredicted RBP16.27■□□□□ 0.19
ACTB-207ENST00000462494 WDR48Q8TAF3 677 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 DNASE1L2Q92874 299 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 RPL3LQ92901 407 aaKnown RBP16.27■□□□□ 0.19
ACTB-207ENST00000462494 FAM83CQ9BQN1 747 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 TMEM121BQ9BXQ6 578 aaPredicted RBP16.27■□□□□ 0.19
ACTB-207ENST00000462494 ALOXE3Q9BYJ1 711 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 BHLHE41Q9C0J9 482 aaPredicted RBP16.27■□□□□ 0.19
ACTB-207ENST00000462494 OR2AG1Q9H205 316 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 ARMC7Q9H6L4 198 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 AMBNQ9NP70 447 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 GULP1Q9UBP9 304 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 PNMA8BQ9ULN7 279 aaPredicted RBP16.27■□□□□ 0.19
ACTB-207ENST00000462494 RNF6Q9Y252 685 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 B3GNT3Q9Y2A9 372 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 MAP4K5Q9Y4K4 846 aa16.27■□□□□ 0.19
ACTB-207ENST00000462494 CARNS1A5YM72 827 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 TGFBR1P36897 503 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
ACTB-207ENST00000462494 METAP1P53582 386 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 SPIBQ01892 262 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 C2orf80Q0P641 193 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 TRIM16LQ309B1 348 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 PAGE2BQ5JRK9 111 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 PERM1Q5SV97 790 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 ARMCX6Q7L4S7 300 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 TRMT11Q7Z4G4 463 aaKnown RBP16.26■□□□□ 0.19
ACTB-207ENST00000462494 TSEN54Q7Z6J9 526 aaKnown RBP16.26■□□□□ 0.19
ACTB-207ENST00000462494 KLHDC8AQ8IYD2 350 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 NFKBIDQ8NI38 313 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 IPCEF1Q8WWN9 437 aaPredicted RBP16.26■□□□□ 0.19
ACTB-207ENST00000462494 HRASLS5Q96KN8 279 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 ZSWIM3Q96MP5 696 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 ZNF300Q96RE9 604 aaPredicted RBP16.26■□□□□ 0.19
ACTB-207ENST00000462494 PITX2Q99697 317 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 BCL7BQ9BQE9 202 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 WDR12Q9GZL7 423 aaKnown RBP16.26■□□□□ 0.19
ACTB-207ENST00000462494 SELENONQ9NZV5 590 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 TBC1D14Q9P2M4 693 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 DAPK2Q9UIK4 370 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.26■□□□□ 0.192e-27■□□□□ 8.5
ACTB-207ENST00000462494 LYVE1Q9Y5Y7 322 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 K7ESM1 405 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 CD36P16671 472 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 PTPN2P17706 415 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 SERPINB10P48595 397 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 CDH12P55289 794 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 MVKQ03426 396 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 PPIGQ13427 754 aaKnown RBP eCLIP16.26■□□□□ 0.19
ACTB-207ENST00000462494 SCARB2Q14108 478 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 ZNF77Q15935 545 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 CYP2A13Q16696 494 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 GCNT6Q5T4J0 391 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 SLC5A8Q8N695 610 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 ING5Q8WYH8 240 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 PPCDCQ96CD2 204 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 COPS4Q9BT78 406 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 ATAD3AQ9NVI7 634 aa16.26■□□□□ 0.19
ACTB-207ENST00000462494 NFKBIL1Q9UBC1 381 aaPredicted RBP16.26■□□□□ 0.19
ACTB-207ENST00000462494 PCM1Q15154 2024 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 PIPSLA2A3N6 862 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 ADAMDEC1O15204 470 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 CHI3L1P36222 383 aaPredicted RBP16.25■□□□□ 0.19
ACTB-207ENST00000462494 MAPK9P45984 424 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 BCAP31P51572 246 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 MVDP53602 400 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 TAS2R50P59544 299 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 PCDH1Q08174 1060 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 SYT16Q17RD7 645 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 C2orf73Q8N5S3 287 aaPredicted RBP16.25■□□□□ 0.19
ACTB-207ENST00000462494 VN1R2Q8NFZ6 395 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 OR10G2Q8NGC3 310 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 PROX1Q92786 737 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 GABARAPL3Q9BY60 117 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 TRIM39Q9HCM9 518 aa16.25■□□□□ 0.19
ACTB-207ENST00000462494 AKIP1Q9NQ31 210 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms