RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 OR52N2Q8NGI0 321 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 CREB3L4Q8TEY5 395 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 ZNF480Q8WV37 535 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 SLC13A3Q8WWT9 602 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 PEX13Q92968 403 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 TBC1D20Q96BZ9 403 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 PTCHD1Q96NR3 888 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 ALPK1Q96QP1 1244 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 OR1F2PQ96R84 312 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 CCDC77Q9BR77 488 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 CCDC68Q9H2F9 335 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 RHBGQ9H310 441 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 TSPY26PQ9H489 355 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 TIMMDC1Q9NPL8 285 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 PNPLA3Q9NST1 481 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 RIMKLBQ9ULI2 386 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 ZNF148Q9UQR1 794 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 ACANP16112 2415 aa7.39□□□□□ -1.23
HPS4-207ENST00000459918 PRRC2AP48634 2157 aaKnown RBP7.39□□□□□ -1.23
HPS4-207ENST00000459918 HRNRQ86YZ3 2850 aaPredicted RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 CTAGE9A4FU28 777 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SAGE2PA6NJ88 616 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 A8MVJ9 347 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 E7ENX8 843 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 CDK2AP1O14519 115 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ZBTB14O43829 449 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 PSIP1O75475 530 aaKnown RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 CTAG2O75638 210 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 VAPBO95292 243 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ESR1P03372 595 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ERGP11308 486 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 IL10P22301 178 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 HRH2P25021 359 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 PSMA3P25788 255 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SSR4P51571 173 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 MLF1P58340 268 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 PPIAP62937 165 aaKnown RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 ADAM8P78325 824 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 BASP1P80723 227 aaKnown RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 RHAGQ02094 409 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 TAP2Q03519 686 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 RELAQ04206 551 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 TBX2Q13207 712 aaPredicted RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 KCNJ11Q14654 390 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 HERC3Q15034 1050 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 TYSND1Q2T9J0 566 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SKOR2Q2VWA4 1001 aaPredicted RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 DEFB134Q4QY38 66 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 PCID2Q5JVF3 399 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 CAPN13Q6MZZ7 669 aaPredicted RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 CASC4Q6P4E1 433 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 CLEC9AQ6UXN8 241 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 UBE2R2Q712K3 238 aaPredicted RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 PEX26Q7Z412 305 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 CAMKMTQ7Z624 323 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SLC26A11Q86WA9 606 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 PDSS2Q86YH6 399 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SHISA5Q8N114 240 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ARHGEF39Q8N4T4 335 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 TBC1D19Q8N5T2 526 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ELP5Q8TE02 316 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 NUDT8Q8WV74 236 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SREK1Q8WXA9 508 aaKnown RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 ASB15Q8WXK1 588 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ATG4AQ8WYN0 398 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ALG3Q92685 438 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 CALR3Q96L12 384 aaKnown RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 SMC6Q96SB8 1091 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SMR3AQ99954 134 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 IL22Q9GZX6 179 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 LDAHQ9H6V9 325 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ZNF395Q9H8N7 513 aaPredicted RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 TMEM184CQ9NVA4 438 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 HPF1Q9NWY4 346 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 BFARQ9NZS9 450 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 KCMF1Q9P0J7 381 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 SAMD15Q9P1V8 674 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ACAD8Q9UKU7 415 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 PACSIN2Q9UNF0 486 aaPredicted RBP7.38□□□□□ -1.23
HPS4-207ENST00000459918 L3MBTL1Q9Y468 752 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 ABCA4P78363 2273 aa7.38□□□□□ -1.23
HPS4-207ENST00000459918 FAM47E-STBD1D6RA91 191 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 G3V3Y1 287 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 BCKDKO14874 412 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 PROM1O43490 865 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 AVILO75366 819 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 ITGA10O75578 1167 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 MYO1DO94832 1006 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 RAF1P04049 648 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 PAMP19021 973 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 PTMSP20962 102 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 MAOAP21397 527 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 NMBRP28336 390 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 STIP1P31948 543 aaKnown RBP7.37□□□□□ -1.23
HPS4-207ENST00000459918 COILP38432 576 aaPredicted RBP7.37□□□□□ -1.23
HPS4-207ENST00000459918 PEX19P40855 299 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 CLCN2P51788 898 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 PRSS12P56730 875 aa7.37□□□□□ -1.23
HPS4-207ENST00000459918 SNRPNP63162 240 aaKnown RBP7.37□□□□□ -1.23
HPS4-207ENST00000459918 MPP1Q00013 466 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms