RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 MATN3O15232 486 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 TPPPO94811 219 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 CSN2P05814 226 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 L1CAMP32004 1257 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ETV6P41212 452 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 NDUFV1P49821 464 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 MTPNP58546 118 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SNTA1Q13424 505 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SELPLGQ14242 412 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 PTPN20Q4JDL3 420 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 C9orf64Q5T6V5 341 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ANKRD54Q6NXT1 300 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 TRAPPC5Q8IUR0 188 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SPATA22Q8NHS9 363 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 GIMAP5Q96F15 307 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ZBED6CLQ96FA7 236 aaPredicted RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 FBXL20Q96IG2 436 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 NECAB3Q96P71 396 aaPredicted RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 SNX18Q96RF0 628 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 FAM86C1Q9NVL1 165 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 DNMT3LQ9UJW3 386 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ZNF510Q9Y2H8 683 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 TIMM22Q9Y584 194 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 KIAA1217Q5T5P2 1943 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 FLRT2O43155 660 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SSX4O60224 188 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 CREG1O75629 220 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 KRT33AO76009 404 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SNAPINO95295 136 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 MTHFD1P11586 935 aaKnown RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 CDK4P11802 303 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 OR1D2P34982 312 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 DUOXA1Q1HG43 343 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 HES5Q5TA89 166 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 GALNT13Q8IUC8 556 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 JOSD2Q8TAC2 188 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 C2orf15Q8WU43 125 aaKnown RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 CHPT1Q8WUD6 406 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 CNTNAP3BQ96NU0 1288 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 MRI1Q9BV20 369 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 NKX2-4Q9H2Z4 354 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 POPDC3Q9HBV1 291 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 CHRAC1Q9NRG0 131 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 RIMKLBQ9ULI2 386 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ZNF487B1APH4 448 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SNAP29O95721 258 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SOD2P04179 222 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 TFPTP0C1Z6 253 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 RHOQP17081 205 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 AQP1P29972 269 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 PKLRP30613 574 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 GNALP38405 381 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 GATMP50440 423 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 NDST2P52849 883 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 GK2Q14410 553 aaPredicted RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 PARP14Q460N5 1801 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 VARS2Q5ST30 1063 aaKnown RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 C10orf62Q5T681 223 aaPredicted RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 AGAP6Q5VW22 663 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 TICAM1Q8IUC6 712 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SLC7A6OSQ96CW6 309 aaPredicted RBP9.45□□□□□ -0.9
UFD1-205ENST00000459854 AGAP4Q96P64 663 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ACBD6Q9BR61 282 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 SLC6A16Q9GZN6 736 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 AKTIPQ9H8T0 292 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 HEBP1Q9NRV9 189 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 EXTL2Q9UBQ6 330 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 ADAMTS6Q9UKP5 1117 aa9.45□□□□□ -0.9
UFD1-205ENST00000459854 F5H0A9 414 aaPredicted RBP9.44□□□□□ -0.9
UFD1-205ENST00000459854 GMDSO60547 372 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 OR4F21O95013 312 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 OAZ2O95190 189 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 RENP00797 406 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 SRCP12931 536 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
UFD1-205ENST00000459854 ZNF132P52740 706 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 HNRNPA0Q13151 305 aaKnown RBP9.44□□□□□ -0.9
UFD1-205ENST00000459854 CLLU1OSQ5K130 101 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 CYS1Q717R9 158 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 MINDY1Q8N5J2 469 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 RERGQ96A58 199 aaPredicted RBP9.44□□□□□ -0.9
UFD1-205ENST00000459854 AZIN2Q96A70 460 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 TIGARQ9NQ88 270 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 ERVK-19Q9WJR5 959 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 NUBP2Q9Y5Y2 271 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 CA3P07451 260 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 SSR2P43308 183 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 CYCSP99999 105 aaKnown RBP9.44□□□□□ -0.9
UFD1-205ENST00000459854 DEFA6Q01524 100 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 EMX2Q04743 252 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 MBTPS1Q14703 1052 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 SHHQ15465 462 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 ARSKQ6UWY0 536 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 ZC3H3Q8IXZ2 948 aaKnown RBP9.44□□□□□ -0.9
UFD1-205ENST00000459854 SLC35G5Q96KT7 338 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 MUS81Q96NY9 551 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 OR52B2Q96RD2 323 aa9.44□□□□□ -0.9
UFD1-205ENST00000459854 OR51E2Q9H255 320 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms