RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ZNF860A6NHJ4 632 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 SAGE2PA6NJ88 616 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 SLC16A5O15375 505 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 NDUFS4O43181 175 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 FGGP02679 453 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 F7P08709 466 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-227ENST00000458564 CDH1P12830 882 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 NPPBP16860 134 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 ALOX12P18054 663 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 MAGEA3P43357 314 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 KCNJ1P48048 391 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 ST13P50502 369 aaKnown RBP9.77□□□□□ -0.85
HDLBP-227ENST00000458564 HLCSP50747 726 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 ANKRD22Q5VYY1 191 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 C3P1Q6ZMU1 363 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 SPNS2Q8IVW8 549 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 KIF2BQ8N4N8 673 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 MCUQ8NE86 351 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 OR4K1Q8NGD4 311 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 OR5T3Q8NGG3 340 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 FAM57AQ8TBR7 257 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 CALML6Q8TD86 181 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 TMEM125Q96AQ2 219 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 HAUS8Q9BT25 410 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 AARSD1Q9BTE6 412 aaKnown RBP9.77□□□□□ -0.85
HDLBP-227ENST00000458564 PARVBQ9HBI1 364 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 XAB2Q9HCS7 855 aaKnown RBP9.77□□□□□ -0.85
HDLBP-227ENST00000458564 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 ADAMTS6Q9UKP5 1117 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 GUCA1BQ9UMX6 200 aa9.77□□□□□ -0.85
HDLBP-227ENST00000458564 KLF13Q9Y2Y9 288 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-227ENST00000458564 TCRBV16S1A1N1A0A5B0 115 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 TRBC2A0A5B9 178 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 SDR42E2A6NKP2 422 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 FOXO6A8MYZ6 492 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 FCHO1O14526 889 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 TFECO14948 347 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-227ENST00000458564 ZNHIT1O43257 154 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 CD1EP15812 388 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 PTGER1P34995 402 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 PTGS2P35354 604 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 RGS4P49798 205 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 CCR8P51685 355 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 ITGA8P53708 1063 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 TIAL1Q01085 375 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDLBP-227ENST00000458564 TFF3Q07654 80 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
HDLBP-227ENST00000458564 GPS1Q13098 491 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 NAE1Q13564 534 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 TERF2Q15554 542 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 DEFB134Q4QY38 66 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 UGT3A1Q6NUS8 523 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 MBOAT1Q6ZNC8 495 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 CD163Q86VB7 1156 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 MARVELD2Q8N4S9 558 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 ZFP62Q8NB50 900 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-227ENST00000458564 NFAM1Q8NET5 270 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-227ENST00000458564 C16orf52Q8NHV5 167 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 NT5CQ8TCD5 201 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 ASB5Q8WWX0 329 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 SERPINB12Q96P63 405 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 ATG10Q9H0Y0 220 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
HDLBP-227ENST00000458564 TNFRSF10DQ9UBN6 386 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 TRMT6Q9UJA5 497 aaKnown RBP9.76□□□□□ -0.85
HDLBP-227ENST00000458564 FBXO5Q9UKT4 447 aa9.76□□□□□ -0.85
HDLBP-227ENST00000458564 SCN3AQ9NY46 2000 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 KLRC4-KLRK1H3BQV0 150 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 CHST10O43529 356 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 CEP104O60308 925 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 PRMT3O60678 531 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 HAUS5O94927 633 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 TFEBP19484 476 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 MSX1P28360 303 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 CHRNB4P30926 498 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 AHRP35869 848 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 MEOX1P50221 254 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 AP1S2P56377 157 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 RGS1Q08116 209 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 TRIP13Q15645 432 aaPredicted RBP9.75□□□□□ -0.85
HDLBP-227ENST00000458564 PHKG1Q16816 387 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 CMPK2Q5EBM0 449 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 TMEM211Q6ICI0 200 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 ARHGAP11AQ6P4F7 1023 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 KIAA0408Q6ZU52 694 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 ABHD13Q7L211 337 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 PALM2Q8IXS6 379 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 AGGF1Q8N302 714 aaeCLIP9.75□□□□□ -0.85
HDLBP-227ENST00000458564 TBC1D19Q8N5T2 526 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 APCDD1LQ8NCL9 501 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 OR56A3Q8NH54 315 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 LILRB4Q8NHJ6 448 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 EEF1AKMT1Q8WVE0 214 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 PTCHD1Q96NR3 888 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 OR4K3Q96R72 315 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 FAM167BQ9BTA0 163 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 RBSNQ9H1K0 784 aa9.75□□□□□ -0.85
HDLBP-227ENST00000458564 TP63Q9H3D4 680 aaPredicted RBP9.75□□□□□ -0.85
HDLBP-227ENST00000458564 PRDM9Q9NQV7 894 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms