RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SYNDIG1Q9H7V2 258 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRIM45Q9H8W5 580 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SIAEQ9HAT2 523 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 C3orf14Q9HBI5 128 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZBTB20Q9HC78 741 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SMURF1Q9HCE7 757 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 EXOSC4Q9NPD3 245 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 MRPL17Q9NRX2 175 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 INIPQ9NRY2 104 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC6A13Q9NSD5 602 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SPATA6Q9NWH7 488 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 AHSPQ9NZD4 102 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SPG21Q9NZD8 308 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SH3BP4Q9P0V3 963 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 DNMT3BQ9UBC3 853 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SEC14L4Q9UDX3 406 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ATP6V1HQ9UI12 483 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADAM30Q9UKF2 790 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 UTS2RQ9UKP6 389 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SSR3Q9UNL2 185 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 MGAT4BQ9UQ53 548 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC22A14Q9Y267 594 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 IFT52Q9Y366 437 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 HCN4Q9Y3Q4 1203 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 RPL36Q9Y3U8 105 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 PCDHGB6Q9Y5F9 930 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 PCDHGA6Q9Y5G7 932 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 PCDHGA3Q9Y5H0 932 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 PCDHGA2Q9Y5H1 932 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 KLK4Q9Y5K2 254 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 KCNE2Q9Y6J6 123 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A1W2PQ45 241 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A1W2PQY0 241 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A1W2PRB8 838 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRBC2A0A5B9 178 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 C1orf226A1L170 272 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCDC182A6NF36 153 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARHGEF33A8MVX0 844 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 A8MX80 341 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 UPK3BL1B0FP48 263 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 CENPBD1B2RD01 187 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 NT5C1B-RDH14C9J2C7 533 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 UPK3BL2E5RIL1 263 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 E7EQ34 232 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 GFYI3L273 518 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 TLR4O00206 839 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 FOXE1O00358 373 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 PITPNM1O00562 1244 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 RGS5O15539 181 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARHGEF9O43307 516 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 SMAD6O43541 496 aaKnown RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 TLL1O43897 1013 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 KIAA0513O60268 411 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 PCDHGA12O60330 932 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 GPR37L1O60883 481 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 AOC2O75106 756 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 PSIP1O75475 530 aaKnown RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 ABLIM3O94929 683 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 FGF19O95750 216 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 VIPP01282 170 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 LRG1P02750 347 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 SOD2P04179 222 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 RB1P06400 928 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 STSP08842 583 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 C1SP09871 688 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 GSTT2P0CG29 244 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 GSTT2BP0CG30 244 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARAFP10398 606 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 PABPC1P11940 636 aaKnown RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 SRCP12931 536 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 PTPN2P17706 415 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 RPL17P18621 184 aaKnown RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 LAG3P18627 525 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 MYL12AP19105 171 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 EPORP19235 508 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 IDSP22304 550 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 UQCRC2P22695 453 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 CXCR2P25025 360 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 PSMA1P25786 263 aaKnown RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 ACVR2AP27037 513 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 POU1F1P28069 291 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 AQP1P29972 269 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 PPP2R1BP30154 601 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCND3P30281 292 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 IFNA8P32881 189 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 CSTF2P33240 577 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 CA8P35219 290 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 IFNGR2P38484 337 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 LIPAP38571 399 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 XCR1P46094 333 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 GSTM5P46439 218 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 BDKRB1P46663 353 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 RPS5P46782 204 aaKnown RBP3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 INPP1P49441 399 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 RGS6P49758 472 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 SEPHS1P49903 392 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 NUDT6P53370 316 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 CRISP1P54107 249 aa3.2□□□□□ -1.9
HMGN1P18-201ENST00000457642 WNT3P56703 355 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms