RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 LPLP06858 475 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CDKN2BP42772 138 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CLCN7P51798 805 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TRAM2Q15035 370 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HMBOX1Q6NT76 420 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FBXO30Q8TB52 745 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MROQ9BYG7 248 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 BRF2Q9HAW0 419 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM165Q9HC07 324 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PPP4R1LQ9P1A2 415 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 A0A1W2PQ45 241 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 A0A1W2PQY0 241 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CBX4O00257 560 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 BNIP3LO60238 219 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OR2B3O76000 313 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OLFM2O95897 454 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CHRNA1P02708 482 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HTR1EP28566 365 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HTR3AP46098 478 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 AQP4P55087 323 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MRPS5P82675 430 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 DEFA6Q01524 100 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TEKQ02763 1124 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CTBP1Q13363 440 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FAM174BQ3ZCQ3 159 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM205Q6UW68 189 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TRIM46Q7Z4K8 759 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 GPR135Q8IZ08 494 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ARMC10Q8N2F6 343 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SUN3Q8TAQ9 357 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM174Q8WUU8 243 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CERS4Q9HA82 394 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TANC2Q9HCD6 1990 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TTC28Q96AY4 2481 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 DAPL1A0PJW8 107 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 GPRIN2O60269 458 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HLA-HP01893 362 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CMPK1P30085 196 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 RBMXP38159 391 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CAP2P40123 477 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SSR2P43308 183 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CCR4P51679 360 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ANTXR2P58335 489 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TAS2R46P59540 309 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TAS2R20P59543 309 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CDKL1Q00532 357 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TLR1Q15399 786 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FSTL4Q6MZW2 842 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 C16orf59Q7L2K0 433 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF280BQ86YH2 543 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 COMMD1Q8N668 190 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OR2L3Q8NG85 312 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 BBS10Q8TAM1 723 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 NDNFQ8TB73 568 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ADAMTS16Q8TE57 1224 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TBATAQ96M53 351 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 DERL2Q9GZP9 239 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OPA3Q9H6K4 179 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 WIF1Q9Y5W5 379 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TBX10O75333 385 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF823P16415 610 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 IL7RP16871 459 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 YBX3P16989 372 aaKnown RBP eCLIP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PRKAR1BP31321 381 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TAS2R30P59541 319 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PRPS1P60891 318 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CSTF1Q05048 431 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SCARB2Q14108 478 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 LAPTM4AQ15012 233 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM35AQ53FP2 167 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CYP4V2Q6ZWL3 525 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF565Q8N9K5 539 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 FAM98AQ8NCA5 519 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 DYNLL2Q96FJ2 89 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF641Q96N77 438 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PCDHB18PQ96TA0 734 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 YIPF2Q9BWQ6 316 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 BHLHE41Q9C0J9 482 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HPF1Q9NWY4 346 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PRR5-ARHGAP8B1AHC4 643 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF670-ZNF695F2Z2N8 137 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 LATS1O95835 1130 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CSF2RAP15509 400 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 IL1RNP18510 177 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 AVPR1BP47901 424 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TOB1P50616 345 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ARHGAP8P85298 464 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 GRK1Q15835 563 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PPP1R3AQ16821 1122 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 KIAA1211LQ6NV74 962 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 EPGNQ6UW88 154 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF584Q8IVC4 421 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 GSTCDQ8NEC7 633 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF431Q8TF32 576 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 C10orf82Q8WW14 230 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MAL2Q969L2 176 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 SPATA17Q96L03 361 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OR14A2Q96R54 314 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TTYH3Q9C0H2 523 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OR2AG1Q9H205 316 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms