RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TNK1Q13470 666 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 NR1D2Q14995 579 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 RPS6KA1Q15418 735 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 TTC31Q49AM3 519 aaPredicted RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 PPP6R3Q5H9R7 873 aaPredicted RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 LRRC73Q5JTD7 316 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 PLPP4Q5VZY2 271 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CASC4Q6P4E1 433 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 BRAT1Q6PJG6 821 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 Q6ZTK2 550 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 TMPRSS11FQ6ZWK6 438 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 ADGRD2Q7Z7M1 963 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 SLC9B2Q86UD5 537 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 GPR180Q86V85 440 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 FAM228AQ86W67 206 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 FAM114A1Q8IWE2 563 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 LRRC43Q8N309 656 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 COLGALT1Q8NBJ5 622 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 SMRP1Q8NCR6 262 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 OR5R1Q8NH85 324 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 ATL1Q8WXF7 558 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 RAD54LQ92698 747 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 SYN2Q92777 582 aaPredicted RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 LYZL4Q96KX0 146 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CSF3RQ99062 836 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CDCA3Q99618 268 aaPredicted RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 TEKT3Q9BXF9 490 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 ZMYND12Q9H0C1 365 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 TMEM117Q9H0C3 514 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 RBM38Q9H0Z9 239 aaKnown RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 LMAN1LQ9HAT1 526 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 DNAJC17Q9NVM6 304 aaKnown RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 TMEM161AQ9NX61 479 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 VPS54Q9P1Q0 977 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 KLHL9Q9P2J3 617 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 MUTYHQ9UIF7 546 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 MTF2Q9Y483 593 aaPredicted RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 LOXL2Q9Y4K0 774 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 NID2Q14112 1375 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 RPS10-NUDT3A0A1W2PQS6 291 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 M0R296 226 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 DEXIO95424 95 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SLC16A8O95907 504 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 LINC00271P0C7V0 271 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ARSBP15848 533 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 DNAJB1P25685 340 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 CDC25AP30304 524 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ARRB2P32121 409 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SERPINB6P35237 376 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SLC9A3P48764 834 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 KHKP50053 298 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ASCL1P50553 236 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 RASSF2P50749 326 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ZP1P60852 638 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SGCBQ16585 318 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 HERC4Q5GLZ8 1057 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-202ENST00000452852 TWF2Q6IBS0 349 aaKnown RBP4.09□□□□□ -1.75
LINC00393-202ENST00000452852 GALNT17Q6IS24 598 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 MFSD12Q6NUT3 480 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 PODNL1Q6PEZ8 512 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ENPP7Q6UWV6 458 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 RUFY3Q7L099 469 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 PIGWQ7Z7B1 504 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ECHDC2Q86YB7 292 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 MAP7D3Q8IWC1 876 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 CCDC83Q8IWF9 413 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ZNF611Q8N823 705 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 NEXN-AS1Q8NBZ9 246 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 C7orf57Q8NEG2 295 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 LPCAT1Q8NF37 534 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 RDM1Q8NG50 284 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 B4GALNT2Q8NHY0 566 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 URGCPQ8TCY9 931 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 OIT3Q8WWZ8 545 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 CRYGNQ8WXF5 182 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SMPDL3BQ92485 455 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 CASP10Q92851 521 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SEMA4DQ92854 862 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 RIT1Q92963 219 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 URB1-AS1Q96HZ7 61 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 RPGRIP1Q96KN7 1286 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 RIT2Q99578 217 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 JPH2Q9BR39 696 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SPXQ9BT56 116 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 GCOM2Q9BZD3 368 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-202ENST00000452852 TRIM7Q9C029 511 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 HIPK2Q9H2X6 1198 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 CATSPERBQ9H7T0 1116 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 Q9N2K0 584 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 RAB9BQ9NP90 201 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 KLHL1Q9NR64 748 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 PDRG1Q9NUG6 133 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ANO10Q9NW15 660 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 P4HTMQ9NXG6 502 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 SPG21Q9NZD8 308 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 TRPC4Q9UBN4 977 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 GMEB2Q9UKD1 530 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 TMCC3Q9ULS5 477 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms