RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SRP68Q9UHB9 627 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC23A1Q9UHI7 598 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 MBD1Q9UIS9 605 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 MKLN1Q9UL63 735 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 TBC1D24Q9ULP9 559 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 SAMHD1Q9Y3Z3 626 aaKnown RBP3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 AFG3L2Q9Y4W6 797 aa3.5□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF646O15015 1829 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MTCL1Q9Y4B5 1905 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 A0A0B4J293 547 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 A0A0U1RQV5 110 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 EXOC1LA0A1B0GW35 172 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 hCG_1807616A0A1W2PRN6 198 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MEIOCA2RUB1 952 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 C2orf78A6NCI8 922 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KRT87PA6NCN2 255 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MBD3L4A6NDZ8 208 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MBD3L3A6NE82 208 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ANKDD1BA6NHY2 528 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 AQP12BA6NM10 295 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CLDN24A6NM45 220 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MARCH11A6NNE9 402 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 HSBP1L1C9JCN9 74 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 F5H6K3 240 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PYCARD-AS1I3L0S3 204 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SGK1O00141 431 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 UBE2CO00762 179 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SOCS2O14508 198 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 AP3D1O14617 1153 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PHYHO14832 338 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRIM24O15164 1050 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PSTPIP1O43586 416 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 HCRTR2O43614 444 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SYNCRIPO60506 623 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CIDEAO60543 219 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RAD1O60671 282 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CST8O60676 142 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SOCS5O75159 536 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PMPCBO75439 489 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TADA2AO75478 443 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GPX5O75715 221 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CYP7B1O75881 506 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CNTN5O94779 1100 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DDNO94850 711 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SUPT7LO94864 414 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GSRP00390 522 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 IFNA2P01563 188 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RAF1P04049 648 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DNTTP04053 509 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 LCKP06239 509 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 C2P06681 752 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ITGA5P08648 1049 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GNAO1P09471 354 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RNF224P0DH78 156 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TXNP10599 105 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CKMT1AP12532 417 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 FOLR2P14207 255 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GYPEP15421 78 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF8P17098 575 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GJA1P17302 382 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ARF4P18085 180 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 XRCC1P18887 633 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CHRM3P20309 590 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 LHCGRP22888 699 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ME2P23368 584 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CRHBPP24387 322 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KLRC2P26717 231 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 LAP3P28838 519 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 FMO4P31512 558 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 VIPR1P32241 457 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CTNNB1P35222 781 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PTPN7P35236 360 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CAPGP40121 348 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC1A3P43003 542 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KIR2DL3P43628 341 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KCNQ1P51787 676 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 STARD6P59095 220 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DEFA1P59665 94 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DEFA3P59666 94 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MRPS22P82650 360 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PLIN5Q00G26 463 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MS4A2Q01362 244 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SP2Q02086 613 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 FSTL1Q12841 308 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PTP4A2Q12974 167 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLAMF1Q13291 335 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SMAD4Q13485 552 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 BFSP2Q13515 415 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RAB32Q13637 225 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RAPSNQ13702 412 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CEACAM7Q14002 265 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 HABP2Q14520 560 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RAB30Q15771 203 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 IL17AQ16552 155 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DPYSL2Q16555 572 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 LRRC26Q2I0M4 334 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CYBRD1Q53TN4 286 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PRAMEF14Q5SWL7 426 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SYT6Q5T7P8 510 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SLC25A25Q6KCM7 469 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms