RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 RPS13P62277 151 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 BST1Q10588 318 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 HERC3Q15034 1050 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 TOR1AIP1Q5JTV8 583 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 TCHHL1Q5QJ38 904 aaPredicted RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 KANK2Q63ZY3 851 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 ATG16L1Q676U5 607 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 NIPAL1Q6NVV3 410 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 C6orf15Q6UXA7 325 aaPredicted RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 ZNF517Q6ZMY9 492 aaPredicted RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 ABHD13Q7L211 337 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 TIPARPQ7Z3E1 657 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 ZFAND4Q86XD8 727 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 DTX1Q86Y01 620 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 NLGN4XQ8N0W4 816 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 RNF175Q8N4F7 328 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 ESX1Q8N693 406 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 GALNT6Q8NCL4 622 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 NLGN4YQ8NFZ3 816 aaPredicted RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 OR2L5Q8NG80 312 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 ZCCHC10Q8TBK6 192 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 DYDC1Q8WWB3 177 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 SELENOMQ8WWX9 145 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 MS4A6EQ96DS6 147 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 SMIM10Q96HG1 83 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 MTERF1Q99551 399 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 REXO4Q9GZR2 422 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 AICDAQ9GZX7 198 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 CCDC86Q9H6F5 360 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 MANSC1Q9H8J5 431 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 BRF2Q9HAW0 419 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 CDC14AQ9UNH5 594 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 MRPS2Q9Y399 296 aaKnown RBP13.34□□□□□ -0.27
CTSS-202ENST00000448301 TIMM22Q9Y584 194 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 SCN3AQ9NY46 2000 aa13.34□□□□□ -0.27
CTSS-202ENST00000448301 TEX51A0A1B0GUA7 166 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 SERTM1A2A2V5 107 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 MEN1O00255 615 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 FOXS1O43638 330 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 ITM2AO43736 263 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 RAD1O60671 282 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 SNNO75324 88 aaPredicted RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 ULK1O75385 1050 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 LYPLA1O75608 230 aaPredicted RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 NSA2O95478 260 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 ONECUT2O95948 504 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 TGFB1P01137 390 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 PDYNP01213 254 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 KLK3P07288 261 aaPredicted RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 HSD3B1P14060 373 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 ALOX12P18054 663 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 ALAS2P22557 587 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 PTX3P26022 381 aaPredicted RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 HSD3B2P26439 372 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 HTR6P50406 440 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 ATP1A2P50993 1020 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 NEK2P51955 445 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 ARFIP1P53367 373 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 PCBP4P57723 403 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 SKP1P63208 163 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 ABHD18Q0P651 414 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 CSTF3Q12996 717 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 CUL3Q13618 768 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 TMEM35AQ53FP2 167 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 SH2D4BQ5SQS7 431 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 DEPDC1Q5TB30 811 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 KHDRBS2Q5VWX1 349 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 FAM219BQ5XKK7 198 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 TRIM40Q6P9F5 258 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 RNF165Q6ZSG1 346 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 CHSY3Q70JA7 882 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 KIRREL3Q8IZU9 778 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 CLYBLQ8N0X4 340 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 SRFBP1Q8NEF9 429 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 FGF11Q92914 225 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 MTFMTQ96DP5 389 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 RNF31Q96EP0 1072 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 SORT1Q99523 831 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 C20orf27Q9GZN8 174 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 ANKHQ9HCJ1 492 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 PRM3Q9NNZ6 103 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 LHX9Q9NQ69 397 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 FARSBQ9NSD9 589 aaKnown RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 NDOR1Q9UHB4 597 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 HAO1Q9UJM8 370 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.33□□□□□ -0.28
CTSS-202ENST00000448301 RAP2CQ9Y3L5 183 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 NUP210LQ5VU65 1888 aa13.33□□□□□ -0.28
CTSS-202ENST00000448301 C4orf51C9J302 202 aa13.32□□□□□ -0.28
CTSS-202ENST00000448301 H0YIG0 161 aa13.32□□□□□ -0.28
CTSS-202ENST00000448301 ERI3O43414 337 aaKnown RBP13.32□□□□□ -0.28
CTSS-202ENST00000448301 SEMA3DO95025 777 aa13.32□□□□□ -0.28
CTSS-202ENST00000448301 CAPNS1P04632 268 aa13.32□□□□□ -0.28
CTSS-202ENST00000448301 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
CTSS-202ENST00000448301 ZNF888P0CJ79 500 aaPredicted RBP13.32□□□□□ -0.28
CTSS-202ENST00000448301 IL1RNP18510 177 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms